Arabidopsis lyrata (lyrate rockcress): 9309486
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Entry
9309486 CDS
T01578
Name
(RefSeq) beta-D-xylosidase 3
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00520
Amino sugar and nucleotide sugar metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
9309486
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
9309486
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Paralog
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Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
9309486
NCBI-ProteinID:
XP_002873418
UniProt:
D7M267
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MASSSLTERNRALFSVSTLLLCFLLCISEQSNAQSSPVFACDVTGNPSLAGLRFCNTGLN
IKSRVTDLVGRLTLEEKIGFLGSNAIGVSRLGIPAYKWWSEALHGVSNVGGGSSFSGQVP
GATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGSAGLTFWSPNVNIFRDPRWGRG
QETPGEDPELSSKYAVAYVRGLQETDGGDPNRLKVAACCKHYTAYDVDNWKDVHRFTFNA
VVNQQDMADTFQPPFKSCVVDGNVASVMCSYNQVNGKPTCADPDLLSGVIRGQWKLNGYI
VSDCDSVDVLYTKQHYTKTPEEAVAKSILAGLDLNCDHFTGQYAMKAVKVGLVNETAIDK
AISNNFATLMRLGFFDGDPKKQQLYGGLGPNDVCTANNQELARDAARQGIVLLKNSAGSL
PLSPSAIKTLAVIGPNANATETMIGNYNGIPCKYTTPLQGLAETVSSTYQLGCNVACAEP
DLGSAAALAASADAVVLVMGADQSIEQENLDRLDLYLPGKQQELVTQVAKVAKGPVVLVI
MSGGAFDITFAKNEEKITGIMWVGYPGEAGGLAIADVIFGRHNPSGNLPMTWYPQSYVEK
VPMTNMNMRPDKSNGYPGRTYRFYTGETVYAFGDGLSYTNFNHQILKAPKLVSLDLDENH
ACRSSECQSVDAIGPHCDNAVGGGLNFEVQLKVRNVGDREGSHTVFLFTTPPEVHGSPRK
HLLGFEKIRLGEKEETVIRFNVDVCKDLSVVDEIGKRKIALGHYLLHVGSFKHSLTISVS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttcgttaacggaacgaaacagagcactcttctctgtttctactcttctc
ctctgtttcctcctctgcatctccgagcaatcgaacgctcagtcttctccagtcttcgcc
tgtgacgtcaccggaaacccttctcttgccgggcttagattctgcaatacggggttgaat
atcaaatcccgagtcaccgatcttgttggaagattgacgttggaggagaaaatcgggttt
ttgggaagcaacgctatcggcgttagccgccttgggattccggcttacaaatggtggtcg
gaggcacttcatggcgtctctaacgtcggaggtggtagtagtttctccgggcaagtccct
ggcgccactagcttcccacaagttatactcacggcagcttctttcaatgtgtctttgttc
caagccattggcaaggttgtatcgacggaggcgagggcaatgtacaatgtgggatcagcc
ggtttaacgttttggtcaccgaatgtgaacatattccgggacccgagatggggaagagga
caagagacccccggcgaggacccagaactctcaagcaaatacgcggtggcttatgttaga
ggtcttcaggagactgacggtggagatcctaaccgtctcaaagtcgctgcttgctgcaaa
cactacaccgcatatgatgttgacaattggaaagacgtccatcgtttcactttcaacgcc
gtggtaaaccaacaagatatggctgatacgtttcaaccaccgttcaagagctgtgtggtt
gatggaaatgtggctagtgtcatgtgttcttacaaccaagttaacggaaaaccgacatgt
gctgatcctgatctgctttccggcgtgatccgcggacaatggaagttaaacggatacatt
gtttcggattgtgattcggtagatgtgttgtacacaaaacaacactataccaagactcca
gaggaagctgtggccaaatctatattagcaggtttggatttgaattgtgatcatttcacg
ggtcaatacgcaatgaaagcggtcaaggtgggtttggtaaatgaaacagctattgacaaa
gcgatttcaaacaatttcgcgactctgatgcgtttagggttcttcgatggagaccctaag
aagcagcagctctacggtggtcttggtcctaatgacgtttgcaccgctaataaccaagaa
ctcgctagagatgccgcaagacaaggcattgtcttgcttaagaactctgctggctcgctt
ccgctctcaccttccgccatcaaaacattagccgtgatcggaccaaacgccaacgccaca
gaaacaatgatcgggaactacaacggtataccatgcaagtacacaacgccgcttcaggga
ctggcagaaacggtgtcgtctacctatcagctgggctgcaacgtcgcatgcgcagaacct
gatttaggctcagccgctgctctggctgcttctgcggatgctgttgtgctcgtgatgggc
gcagaccaatcaattgagcaggagaaccttgaccgactcgacctgtatctgcccggaaaa
caacaagagcttgtgactcaggtggctaaggtggcgaaaggaccggtggtgctagttata
atgtccggtggagcgtttgacattacattcgccaagaacgaagaaaagatcacaggcatt
atgtgggtcggatatcctggtgaagccggcggtctcgccattgctgacgtcatcttcggt
cgtcataatccaagcgggaatttgccgatgacttggtatcctcaatcatatgtggagaaa
gttccgatgacgaatatgaacatgagacccgacaaatcaaacgggtatccgggtcggact
tacagattttacaccggagaaaccgtatacgccttcggagatgggctcagttacactaat
ttcaatcaccagattcttaaagctccgaagctagtctctctcgatcttgacgaaaaccac
gcttgccgatcgtcggaatgccaatcggtggacgcgatcggaccgcactgcgataacgcc
gtcggaggaggattaaatttcgaggttcaattgaaggtaaggaacgtcggagacagagaa
gggagccacacggtgtttctgttcacgacgccgccggaagtacacggatcgccgaggaag
catcttctagggttcgagaagattcgtttaggagaaaaggaagagacggtgattaggttt
aacgtcgatgtgtgtaaggatctgagtgtagttgatgagatcggaaaaaggaaaatcgcg
ttgggtcattatctgctccacgtgggtagttttaaacattcattgaccattagcgtgtca
tag
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