KEGG   Arabidopsis lyrata (lyrate rockcress): 9309624
Entry
9309624           CDS       T01578                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta 1 isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:aly01006]
    9309624
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9309624
Enzymes [BR:aly01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     9309624
Prenyltransferases [BR:aly01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   9309624
Membrane trafficking [BR:aly04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    9309624
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    9309624
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_N SQHop_cyclase_C
Other DBs
NCBI-GeneID: 9309624
NCBI-ProteinID: XP_020878342
LinkDB
Position
Unknown
AA seq 321 aa
MSSTSSSQMGQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCV
SEDEVVSWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKL
QNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVEYIVSCKNLDGGFGCTPG
AESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQLKGGGLNGRPEKLADVCYSWWVL
SSLIMIDRVHWIDKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGV
KVIDPAYALPVDVVNRIIFTK
NT seq 966 nt   +upstreamnt  +downstreamnt
atgagctctacgtcttcctcccagatgggtcagcttgtagctgacaagcatgtacgttac
attctgatggcagaaaagaagaaagagagttttgagtctgtggtgatggatcatctaaga
atgaatggtgcttactggggactcaccactctcgacttactcgacaagctgggctgtgtt
tctgaagatgaagtcgtttcatggctcatgacttgccagcatgaatctggtggctttgcc
ggtaatactggacacgatccacatattctatatacactcagtgccgtacaaatcttggcc
ctctttgacaaaattaacattcttgacattgggaaagtatcaagttatgttgctaagttg
cagaacgaagatggatccttctcaggagatatgtggggagaaatagatacgaggttttcg
tacatagctatttgctgtctctcaatattgaaatgtcttgacaaaatcaatgtggagaag
gcagttgagtacattgtgagctgcaaaaacctggatggtggttttgggtgcacacctgga
gcagagtcccatgcaggacagattttctgctgtgtgggtgctcttgctatcactgggagt
ctccatcatgttgataaggacttacttggttggtggttatgtgaaagacaattaaagggt
gggggcttaaatggacgacctgagaaactcgctgatgtttgctattcttggtgggtccta
tcgagcctaatcatgatagatagagttcactggatcgacaaagcaaagcttgtcaagttc
attttggactgtcaggatttggaaaacggaggcatctcagaccgacccgacgatgctgtt
gatatcttccacacctactttggagttgctgggctttccctccttgagtatcctggagtc
aaagtaattgatccagcctatgctttgcctgttgatgtcgtcaaccgtattatattcacc
aaatga

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