Arabidopsis lyrata (lyrate rockcress): 9309860
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Entry
9309860 CDS
T01578
Name
(RefSeq) THO complex subunit 7A
KO
K13176
THO complex subunit 7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9309860
09122 Translation
03013 Nucleocytoplasmic transport
9309860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9309860
03041 Spliceosome [BR:
aly03041
]
9309860
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
9309860
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
9309860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
mRNA_cap_C
Het-C
APG6_N
DNA_topoisoIV
Motif
Other DBs
NCBI-GeneID:
9309860
NCBI-ProteinID:
XP_002873792
UniProt:
D7M882
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MSVRARRIVSGRSDTVAANFAFDPLNDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI
ELDKEEDNYSDCGRLAKAFLQELSAFEIPLLKSHAVVAANLREKENFNELKDETNRQIMQ
AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT
ASWRLLELRKKQFALLLHVVDELQETIEDEQKNMVEEMQRNITADGAEAMSID
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgagagctaggaggattgtttctggtaggtcagatactgtagcagctaatttt
gcgtttgatccgttaaatgatgacaaaattataagaaataggcttctcacacgcacgacc
accaccagaggcgaacctccattgaagaagcttcagaagaaattcacttctttcgttatc
gaactagacaaagaagaagataactacagtgactgtggtaggctcgccaaagctttcttg
caagaactttccgcttttgagattccgcttcttaagagccatgcggttgttgctgccaat
cttagggaaaaggagaacttcaacgagttgaaagatgagacgaataggcagataatgcag
gcacaagctgatatagaagatcttaagaaacagctcgaagagagtaagatagagagacag
cagaaagaggagtgtgaagccattaggaaacttatctctgcgcagccaccgaggtcagag
acacagaaagttatacatgaattgaagaaggagattgcagaactcgaggctgagaacaca
gcaagttggagacttcttgagctaaggaagaagcagtttgcattgttgttgcatgtggtg
gatgagttgcaggagacaatagaggatgaacagaagaatatggtggaagaaatgcagagg
aacattaccgccgatggcgctgaagccatgtccatcgattag
DBGET
integrated database retrieval system