KEGG   Arabidopsis lyrata (lyrate rockcress): 9309860
Entry
9309860           CDS       T01578                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013  Nucleocytoplasmic transport
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9309860
  09122 Translation
   03013 Nucleocytoplasmic transport
    9309860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9309860
   03041 Spliceosome [BR:aly03041]
    9309860
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     9309860
Spliceosome [BR:aly03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    9309860
SSDB
Motif
Pfam: THOC7 mRNA_cap_C Het-C APG6_N DNA_topoisoIV
Other DBs
NCBI-GeneID: 9309860
NCBI-ProteinID: XP_002873792
UniProt: D7M882
LinkDB
Position
Unknown
AA seq 233 aa
MSVRARRIVSGRSDTVAANFAFDPLNDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI
ELDKEEDNYSDCGRLAKAFLQELSAFEIPLLKSHAVVAANLREKENFNELKDETNRQIMQ
AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT
ASWRLLELRKKQFALLLHVVDELQETIEDEQKNMVEEMQRNITADGAEAMSID
NT seq 702 nt   +upstreamnt  +downstreamnt
atgtcagtgagagctaggaggattgtttctggtaggtcagatactgtagcagctaatttt
gcgtttgatccgttaaatgatgacaaaattataagaaataggcttctcacacgcacgacc
accaccagaggcgaacctccattgaagaagcttcagaagaaattcacttctttcgttatc
gaactagacaaagaagaagataactacagtgactgtggtaggctcgccaaagctttcttg
caagaactttccgcttttgagattccgcttcttaagagccatgcggttgttgctgccaat
cttagggaaaaggagaacttcaacgagttgaaagatgagacgaataggcagataatgcag
gcacaagctgatatagaagatcttaagaaacagctcgaagagagtaagatagagagacag
cagaaagaggagtgtgaagccattaggaaacttatctctgcgcagccaccgaggtcagag
acacagaaagttatacatgaattgaagaaggagattgcagaactcgaggctgagaacaca
gcaagttggagacttcttgagctaaggaagaagcagtttgcattgttgttgcatgtggtg
gatgagttgcaggagacaatagaggatgaacagaagaatatggtggaagaaatgcagagg
aacattaccgccgatggcgctgaagccatgtccatcgattag

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