Arabidopsis lyrata (lyrate rockcress): 9310131
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Entry
9310131 CDS
T01578
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
9310131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9310131
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aly03037
]
9310131
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
9310131
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
9310131
Chromatin remodeling factors
SRCAP complex
9310131
INO80 complex
9310131
INO80 complex (yeast)
9310131
SWR1 complex
9310131
ASTRA complex
9310131
Cilium and associated proteins [BR:
aly03037
]
Motile cilia and associated proteins
Dynein assembly factors
9310131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
AAA_18
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
TsaE
DnaB_C
GvpD_P-loop
AAA_7
nSTAND3
AAA_28
ResIII
Zeta_toxin
AAA_11
NPHP3_N
IstB_IS21
Rad17
Motif
Other DBs
NCBI-GeneID:
9310131
NCBI-ProteinID:
XP_002874064
UniProt:
D7M0W5
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK
QKKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL
VIIRTQIYNPSEMIQIIAIRAQVEELTVDEECLVLLGDIGQRTSLRHAVQLLSPASIVAK
MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaaagattgaagaaattcagtccaccgctaaaaaacagcggattgctact
cacacccatatcaaaggtcttggccttgagccaaccggtattcctataaaattggcggct
ggatttgttggtcaacttgaggctagagaggcagctggtcttgtagtggacatgattaag
cagaagaaaatggcgggtaaggctcttttacttgctggacctcctggaaccgggaaaaca
gcattggcccttggaatttcccaagagttgggaagtaaggttccattctgtccaatggtt
ggatctgaggtttactcatcagaggttaagaaaacagaggttctcatggagaattttaga
cgtgccattggtctacgtatcaaggaaaccaaagaagtctatgaaggggaggtcaccgag
ctgtcaccagaagaaactgaaagcctcactggaggctatggtaaaagcatcagccatgtt
gtcattacactcaagacagtcaaaggaactaaacatctgaagttggatcccactatatac
gatgccttgattaaggaaaaggtagctgtaggagatgttatctatatcgaagcaaacagt
ggagctgtcaaacgggtaggtagaagtgatgcttttgccactgaattcgatctggaagca
gaagaatatgttccacttcccaaaggagaggttcacaaaaagaaagagatagtacaggat
gtcacactccaagatctggatgcagcaaatgctcgacctcaaggtggccaggatatactt
tctttgatgggacaaatgatgaaaccccggaagactgagatcactgataagcttcggcaa
gaaattaacaaggttgtgaaccgatatatagatgaaggtgtggcggagcttgttcctgga
gttctatttatcgatgaggttcatatgcttgatatggagtgcttttcatacttgaaccgt
gctcttgagagctcattatctcccatagtgatatttgcaacaaatagaggtgtttgcaac
gtaagagggactgatatgcccagcccccatggagtccctattgacctattggatcgattg
gtcatcatccggactcaaatctataatccctctgaaatgatacagattatagccattcgt
gcgcaagttgaagaattaaccgtggatgaagaatgcttggttctacttggggacattggg
caaagaacttcactaaggcacgctgtgcagcttctgtctcctgccagcattgtggcgaaa
atgaatggacgtgacaatatttgcaaggctgatatcgaggaagtaacatcactctacttg
gatgccaaatcttcagcaaagcttttgcatgagcaacaagaaaaatacatctcataa
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