Arabidopsis lyrata (lyrate rockcress): 9310235
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Entry
9310235 CDS
T01578
Name
(RefSeq) acidic endochitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00520
Amino sugar and nucleotide sugar metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
9310235
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
9310235
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
9310235
NCBI-ProteinID:
XP_020876141
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All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MTKNMTNINLLKHVIYLLFFISCFITKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAY
VNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSI
GSREDAKVVTDYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARSLSKLSHR
GRKVYLTGAPQCPFPDRLMGSALNTRRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTT
SITAQKIFLGLPAAPEASGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS
SILASV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaacatgactaacattaatcttctcaagcatgttatataccttctcttcttc
ataagctgctttattaccaaaccctccgatgcatccagaggtggcatagccatctattgg
ggccaaaatggcaacgaaggtaatctctcggccacatgtgccaccggccggtatgcttac
gtcaacgtcgcctttcttgtgaaattcggaaatggtcaaacaccggagctcaaccttgcc
ggccactgcaaccctgcggccaacacttgcacccattttggctctcaggtcaaagattgt
cagtctcgtggcatcaaggttatgttgtctctcggcggcgggatcggaaactactcgatt
gggtccagggaggacgcaaaagtcgtcactgattacctgtggaacaatttcttgggagga
aaatcatcatcacgtcccttaggtgatgctgttcttgatggtatcgatttcaatatcgag
cttggctctcctcaacactgggatgatctcgccaggtctctctcaaagcttagccacaga
ggcagaaaagtatatttaacaggagctcctcaatgtccatttccagacagattaatggga
agtgctctcaacactagacgttttgactatgtttggatccagttctacaacaatccaccg
tgttcatactcttcaggaaatactcaaaacctctttgattcgtggaacaagtggaccact
tcaatcacagcccagaaaatcttcttgggtcttccggcagctcccgaagcttccggaagt
ggctatatcccgccagatgtactgacttcacagatacttccgactttaaagaagtctagg
aagtatggaggtgtaatgctttggtctaaattttgggatgataaaaatggatacagttca
tctatattggctagtgtgtga
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