Arabidopsis lyrata (lyrate rockcress): 9310368
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Entry
9310368 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 2
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00520
Amino sugar and nucleotide sugar metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
9310368
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
9310368
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Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-L-AF_C
CBM_4_9
DUF3805
Motif
Other DBs
NCBI-GeneID:
9310368
NCBI-ProteinID:
XP_020876162
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MDMETSWRFLKSVCILSFLIGACSVYQSLCLVDAQADAIVTLQVDASNMTRRPIPETLFG
IFFEEINHAGAGGLWAELVSNRGFEAGGQTIPSNIWPWSIIGDESSIYVVTDRSSCFERN
KIALKMEVLCDSNGSSNCCPSGGVGIYNPGYWGMNIEEAKKYKVVFYVRSTGDIDVSVSF
TSSNGSLTLASENIIALASDVSNWTKKEMLLEANGTDNGARLQFTTTKKGSIWFDQVSAM
PMDTYKGHGPALGFRNDLFQMMVDLKPRFIRFPGGCFVEGEWLGNAFRWKETVGAWEERP
GHYGDVWKYWTDDGLGHFEFFQLAEDIGAAPVWVFNNGISHNDQVETENVKPFVQEAIDG
IEFARGDPQSTWGSVRAAMGHPEPFELKYVAVGNEDCFKSYYRGNYLEFYDAIKKAYPDI
KIISNCDASFKPLDHPADYFDYHIYTLAKDLFSRSHDFDNTPRNGPKAFVSEYAVNKTDA
NNGNLLAALGEAAFLLGLEKNSDIVGMVSYAPLFVNTNDKRWIPDAIVFNSSHLYGTPSY
WVQQFFTESSGATLLNSTLKGNSFSIEASAISFQANGKTYIQIKAVNFGEESVNLKVTVT
GLIAKFYGSKKKVLTSANVMDENSFSTPEMIVPQESLLEMTEEEDLMFVLPPHSFSSFDL
LKQSENIIKMPIXDSYNKTSTM
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggacatggagacttcttggagatttctcaaaagtgtttgcatactttcctttctcatt
ggcgcttgttctgtctaccaaagcctttgtcttgtcgatgctcaagcagacgccattgta
acattgcaagtagatgcttctaacatgacaagacgaccaattcctgaaactctattcgga
atcttctttgaggaaataaatcatgctggagcaggtggactatgggctgaacttgttagc
aacagaggatttgaagctggtggacaaaccattccttccaatatctggccttggtccatt
attggagatgaatcatccatatatgtcgttacagaccgttcttcgtgttttgagcgtaac
aagattgctcttaaaatggaagtgctttgtgacagcaatggcagtagcaattgttgtcca
tcaggaggagttgggatttataacccgggttattggggcatgaacattgaagaagcgaag
aaatacaaagtggtgttctatgtgcgttcgaccggagacatcgatgtgtctgtgtcgttt
acaagttcgaatggatcattgactcttgcgtcagaaaatattatagctttggcttctgat
gtttcaaattggactaaaaaggaaatgcttttagaagcaaatggaacagataatggtgca
agacttcagtttacaacaaccaaaaaaggttcaatttggtttgaccaagtctcagccatg
cctatggatacttacaagggccatgggccggctctgggtttcagaaatgatcttttccaa
atgatggttgatctaaaaccgcgtttcatccgattcccgggtggttgttttgtggagggt
gaatggttaggcaatgcattccgctggaaagaaaccgtgggagcttgggaagagagacct
ggccattatggtgatgtttggaagtactggactgatgatggccttggtcactttgaattc
tttcaacttgcagaagacattggtgcagccccagtatgggtgtttaacaatgggatcagt
cacaatgatcaagttgaaacagaaaatgtcaagccttttgttcaagaagcgattgacggt
atagagtttgctcgcggagatcctcagtctacatggggatcggttcgagctgcaatggga
catccagagccttttgaactgaaatatgttgcggtcgggaatgaagattgttttaagagt
tactacagaggaaactatcttgagttttatgatgctatcaaaaaagcttatccagacatc
aaaatcatctccaactgcgatgcatcgtttaagccgctcgatcaccctgctgactacttt
gattaccacatttatactcttgcaaaggatttgttttccaggtcccatgactttgacaat
acaccgcgcaacggtccaaaggcttttgttagcgagtacgctgtaaacaaaacggatgct
aataatggaaaccttttggccgctcttggggaagcagccttcctccttggtttggaaaag
aacagtgacattgtaggaatggttagctatgcacctctctttgtcaacacaaatgataaa
aggtggatccctgatgcaatagtttttaactcgtctcatctatatggaactcctagctat
tgggtccaacagttcttcaccgagtcaagcggagcaactcttctcaattctactcttaag
ggaaactctttttctattgaagcatctgctatctccttccaagccaatggcaaaacttac
atacaaatcaaggctgtaaactttggagaagaatcagtaaatctaaaggtaacggtgacc
ggattgatcgcaaaattttatggatccaagaagaaagtacttacatctgccaatgtgatg
gatgagaattctttctcaaccccagagatgattgtgccgcaagaaagcttgctagagatg
actgaggaggaggaccttatgtttgttctcccgccgcactcgttctcctccttcgatttg
ttgaaacaatctgaaaatatcatcaagatgccaatanntgattcctacaacaaaacttca
acaatgtga
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