Arabidopsis lyrata (lyrate rockcress): 9310402
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Entry
9310402 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 20.6, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9310402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9310402
03036 Chromosome and associated proteins [BR:
aly03036
]
9310402
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
9310402
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
9310402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Ge1_WD40
CFAP43_N
RMC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
9310402
NCBI-ProteinID:
XP_020876930
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MMTSIALALCLTHHSPMVLSIVDDDPQEKTMDSLWKKRHVSDLTRSGSLVGVTEAYLVIP
VDHFLTNPSSLTLSPRAYCRRGSSYVVTEKVEERDDFLKQVWFLRESLVFFFVDIEESIV
VYRLGYTVYLRDASSGCKSVFVTIDEEKGPVTSLNWTQDGRNLVVGLDNSXVQIWDSVSN
RQLRTLKGCHQSRVGSLTWNNHILTTGXRSSIVGTYVVHTQEVCGLKWERSGQQLASGGN
VNVVHIWDCSVSSSNSTRQWLHRFEKHTHTAAVKALVWCPFQASLLATGGGVGDGIIKFW
NXHTGACLNSVETGSQVCSLLWRKSERQLLSSHGFTQNQLTLWKYPSMLKMAELTGHTSR
VLYMAQSPDGCTVASAAGDETLRFWNVSGVPETTKKAAPEPFSHVNRIR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtcgatagctcttgctctgtgtttgacacaccattcaccaatggttctgtcc
attgttgatgatgatccacaggagaagacaatggattcgttgtggaagaaacggcacgtc
tctgacctaactcggtctggttctctggttggagtaacagaagcttatcttgtaataccc
gtagaccactttctaacgaatccttcatctctaacactttctccgagagcttactgtcgt
cgaggatcttcttacgtagtaacagagaaagtggaagagagagacgatttcttgaaacaa
gtttggtttctcagagagagtttggttttcttcttcgtcgacattgaagaatccattgtt
gtttacagattgggatacactgtttacttacgggatgcttctagtggttgtaaatctgtg
tttgtgaccattgatgaagagaaaggacctgtcacaagtttaaactggacgcaagatggt
cgtaatcttgtagttggtcttgataactcttaagtgcagatttgggattctgtttccaat
cgtcaactgagaacattgaaaggttgtcaccagtcaagagttggatcattgacatggaac
aatcacattctaacaactggantgaggtcatccattgtgggaacttatgtggttcacact
caagaggtttgtggtcttaagtgggaaagatctggacaacaactagcaagtggtggtaac
gtcaatgtagtacacatatgggattgttctgtctcctcctcaaactcaactaggcaatgg
ctacataggtttgagaaacatacacatacagctgctgtgaaagctcttgtctggtgccca
ttccaagcgagtctgcttgcaactggtggtggtgtaggagatgggattattaagttctgg
aatnnacacactggggcttgcttgaattcagtagaaactggctctcaagtttgttcattg
ttatggagaaaaagtgaaagacagttacttagctcacatgggtttacacagaatcagctt
acactttggaagtatccatctatgttgaaaatggctgaactcactggtcatacatcaaga
gttctttatatggcacaaagtccggatggttgtaccgtggcttcagcagcaggagacgag
actcttaggttttggaatgtttctggagtaccagagaccaccaagaaagctgctccggaa
ccattttctcatgtgaatcgtattcgttga
DBGET
integrated database retrieval system
