Arabidopsis lyrata (lyrate rockcress): 9310409
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Entry
9310409 CDS
T01578
Name
(RefSeq) putative pectinesterase/pectinesterase inhibitor 28
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Module
aly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9310409
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
9310409
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectinesterase
PMEI
DUF5976
Motif
Other DBs
NCBI-GeneID:
9310409
NCBI-ProteinID:
XP_020876889
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MSYGYDDDAKRKKRYVIISISSVLLISMVVAVTIGVSVNKSDNGGEGEITTSVKAIKDVC
APTDYKETCEDTLRKDAKNTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRTKMA
LDQCKELMDYAIGELSKSFEELGRFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQG
NAGETIKKALKTAVQLTHNGLAMVSEMSNYLGQMQIPEMNSRRLLSQEFPSWMDGRARRL
LNAPMSEVKLDIVVAQDGSGQYKTINEALNYVPKKKNTTFVVHIKAGIYKEYVQVNRSMT
HLVFIGDGPEKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIGFENTAGAIKHQAVAI
RVLSDESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKP
LLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKENSKAYLGRPWKEYSRTIIMN
TFIPDFIPPEGWQPWLGDFGLNTLFYSEVQNTGPGAPITKRVTWPGIKKLSEEEILTFTP
AQYIQGDAWIPGKGVPYIPGLFTGNGSTTNPTELGSTNSTITGSGSSSNTTGSSDSPSTV
VSPSTSPPAGHLGSPPATPSTIVSPSTSPPADHLGSPPTTPSSVVSPSTSPPAGHLGSPP
TTPSTVVSPSTSPSASPSASPSASPSASPSASPSVSPSASPQSSIG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgggtacgacgatgatgcaaagaggaaaaagagatacgttattatctctatc
tcctctgttcttttgatctccatggttgttgcagttaccataggcgttagcgtcaacaag
tccgataacggaggtgaaggagaaatcacaacttctgttaaagccatcaaagatgtttgc
gcaccgacggattacaaggagacttgtgaggatactcttaggaaggatgcgaagaacaca
tcagacccgttggagctagtgaagacagcttttaacgcgacgatgaaacagataagtgac
gtggcaaagaagtcacagactatgattgagctacaaaaggatccgaggacgaagatggct
ttggatcaatgcaaggagctaatggattacgcaatcggtgagcttagtaagtcgtttgag
gagttagggaggttcgaatttcataaggttgatgaagcgttgattaagctgaggatttgg
cttagtgcgacgattagccatgagcaaacttgtcttgatgggtttcaagggacacaaggg
aatgcaggtgagacgattaagaaggcattgaaaactgcggtgcagttaacgcataacggg
cttgcaatggtcagcgagatgtcgaattacttgggacaaatgcagattccggagatgaat
agtcgacggttgttgtcccaagagtttccttcgtggatggatggccgagcgcgtaggctt
ttgaatgctcctatgtccgaggtcaaactggatatcgtggtggcgcaagacggaagtggt
cagtacaagacgatcaatgaagcattgaattatgtcccgaagaagaagaacacgactttc
gtggttcacattaaggccggaatctataaagagtacgttcaggtgaataggagcatgaca
catctggtttttatcggcgatggccctgagaaaactgtcatttccggcagcaaaagttac
aaggatggtattaccacctacaaaaccgccactgttgcaatcgttggagatcatttcatt
gccaagaacattgggttcgagaacacagccggggcaataaagcatcaagcggttgcgatt
agggttctatcagatgagtcaatattctacaattgtaaattcgatggttaccaagatact
ctatatgcacattcccaccgtcagttttaccgcgactgtactatctcgggcaccatcgat
tttctctttggagatgcagctgcggtattccagaattgtactttattggtgagaaagcca
cttctaaatcaagcatgccccattacagcccatggacgtaaagatccgcgagaatccacg
ggatttgttctccaaggatgtacgattgttggtgaaccggattacttggcagtcaaggaa
aatagcaaagcttaccttggaaggccatggaaagagtattcaagaactatcatcatgaac
acgttcatcccagattttattccgccggaaggatggcaaccgtggcttggcgatttcggt
cttaacacacttttctactcggaggtacagaacactgggccaggtgcacctatcacaaaa
cgggttacttggcctggaatcaagaagttgagtgaagaagaaatacttacattcactcca
gctcaatacatccaaggtgatgcttggattccgggtaaaggtgttccgtatatcccaggt
cttttcactggaaatggctcaacaaccaatccgaccgaattgggctccacaaattctacc
ataactggctccggttcgtcttctaacacaacaggttcatcagattcaccttcgacggta
gtgtctccttcaacttctccaccagctggccatcttggttccccaccagctacaccttca
acgatagtgtctccttcaacatctccaccagctgaccatcttggttccccaccaactaca
ccttcatcggtagtgtctccttcaacttctccaccagctggtcatcttggttctccacca
actacaccttcaacagtagtgtctccttcaacatctccttcagcttctccttcagcttca
ccatcagcttctccttcagcttcaccatcagcttctccttcagtttcaccatcagcttct
ccacaaagctcgataggttaa
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