Arabidopsis lyrata (lyrate rockcress): 9310427
Help
Entry
9310427 CDS
T01578
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9310427
03400 DNA repair and recombination proteins [BR:
aly03400
]
9310427
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
9310427
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
9310427
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
9310427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
UBA_7
ResIII
UBA
Motif
Other DBs
NCBI-GeneID:
9310427
NCBI-ProteinID:
XP_020876882
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MDLSSDHVVMKLVEMGFEKLDALDAVKAVGGKSCDDAVEYILKGHDRTGGSAPASSLCSI
GSNKILGKRAMPSSFSSGSKRQSSLLDHFRSVDQNKKKGNTFGIAEVNSQLETVSDTSKE
QIKSLAPVFLESSCFPETELSNGCSEASSTWETRVNSILQNRFGISSLRSFQREALSTWV
AHEDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLSRHRVSACFLGSG
QLDTCIEEKAMQGMYQIIYVCPETVVRLIKPLQKLAKTHGIALFAIDEAHCVSKWGHDFR
PHYRRLSVLRENFCASNLEFLEYDVPIMALTATATVHVQEDIVESLHLSKETQTVLTSFF
RPNLQFSVKHSRTKFASSYAKDFQNLIDLYSEKKKSTGKKLAVISRESEEQTDFGYHDAQ
NIHETDYDEDEEDQENSLAKKNSSNGKELSEEYLEDETDIFQSVDDWDVACGEFCAMPPC
ELLDVPIPSEKQKDLEGLTIIYVPTRKESVNIAKYLCGVGLKAAAYNASLPKKHLRQVHQ
DFHENKLQVVVATIAFGMGIDKKNVRKIIHYGWPQSLEAYYQEAGRAGRDGELAECVLYA
DLSRAPTLLPSRRSKEQTEQAYKMLSDCFRYGMKTSQCRAKILVEYFGEDFSSKKCNLCD
VCTEGPPEQVNVREEANLLFQVINAFHLQVDNDSEHAPYEDYGLGNSKQKKLSHKPNLLF
FISKIREQCQKFKETDCLWWKGLARIMEAKGYIKEMDNKDRRVEIKFIKPTEKGKKQLDF
EDDKPLYVYPEADMLLSLKQDRTYSGFSEWGKGWADPEIRRQRLERRERKPRRERKPRKK
RTRGPSSKKLHPWRSKE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtcttctgatcatgttgttatgaagcttgttgaaatgggttttgaaaagttg
gatgctttggatgctgtgaaagctgtaggtggtaagtcatgtgatgatgctgtggagtat
attttgaagggacatgatagaactggtggatctgcgccggctagttcattatgttctata
gggagtaataagattcttggtaaaagagctatgccatcttcgttttcttcgggttcaaag
cgtcagtctagtttgcttgaccattttagatctgtggaccagaacaagaaaaaaggcaac
acctttgggattgcagaagtgaattctcagttagaaacggtgtccgatacttctaaagag
cagataaagtctcttgctccagtgtttttggagtctagttgttttcctgaaacagaattg
tcaaatggttgctctgaggcttcatcaacgtgggagacaagagttaactctatactacaa
aaccgttttggtatttcatccctgagaagtttccaaagagaggctttgtcaacatgggtt
gctcatgaggactgtcttgttctagctgcaacgggatctgggaaatctctttgtttccag
attcctgcattactaactggaaaagttgttgttgtaatttcacctttgataagcctgatg
catgatcaatgcctcaagctatcaaggcacagagtctctgcttgttttcttggttcaggc
caacttgatacttgcatagaagaaaaagcaatgcagggaatgtatcagattatatatgtt
tgccctgagacagtggttcgactgattaaaccactccagaagcttgcaaagactcatgga
attgctctttttgcaattgatgaagcgcattgtgtatcaaagtggggacatgattttcgt
ccgcactacaggagattatctgtgttgcgggaaaacttctgtgccagcaatttggaattc
ttggaatacgatgtaccgataatggcattgactgctacagccacagttcacgtacaggaa
gatattgttgagtcacttcacctgtcaaaggaaacacaaactgtgcttacttcatttttc
aggccaaatctacaattttcagttaaacatagtcgaaccaagtttgcatcttcatatgca
aaggacttccaaaacttaattgacttatactctgaaaagaaaaagtctaccgggaaaaag
ctagcagtaatctcacgagagtcagaggagcagactgattttggttatcacgatgctcaa
aacatccatgagacagattatgatgaggatgaagaggatcaagaaaactctctggcaaag
aaaaacagttcaaatgggaaagaattgtcagaagagtatctggaagatgaaaccgacatt
ttccagagtgttgatgattgggatgtggcttgtggcgagttttgcgcaatgcctccttgt
gaactcctggatgtacctatcccttctgaaaagcaaaaggatttggaaggactgacaatc
atatacgttcctacaagaaaggagagtgtcaacattgctaaatatctttgtggggttgga
ctgaaggctgcagcttataatgcatcgttgccaaaaaaacatcttagacaagttcaccag
gatttccacgaaaataagcttcaggttgttgttgccacaattgcgtttggaatgggaatt
gacaagaaaaatgttcggaaaatcatccattatggttggccgcagagcttggaagcatac
taccaagaagctggtcgagctggaagagatggcgaattggctgagtgtgtgctctatgct
gatctatcgagagcaccaacgcttttgccaagccgtaggagcaaagaacagacagagcaa
gcatataagatgctatctgattgttttagatatggaatgaagacttcacaatgtcgagcg
aaaatactcgtggagtactttggggaagattttagttccaagaagtgtaacttatgtgat
gtttgcactgaagggcctccggagcaagtaaatgtacgagaggaagctaatcttttgttt
caagtaatcaatgcttttcatttgcaggtagacaatgactctgagcatgcaccatatgaa
gattatggactcggcaacagcaaacaaaagaaattatcccacaagccaaatcttctgttc
ttcatcagtaaaatcagggaacagtgtcaaaaattcaaggaaacagattgtctttggtgg
aaaggtcttgcccgtatcatggaagccaaggggtacatcaaagagatggataacaaggat
cgtcgagttgagattaaatttataaaaccaacagaaaaagggaagaagcaactagatttc
gaagatgacaaaccactctatgtttatccagaagccgacatgctactttcgttgaaacaa
gacagaacatacagcggattctctgaatggggaaaaggatgggcagatccagagatccgg
cgccagcggttagagagaagagaaaggaagccccgaagagaaaggaaaccccgaaaaaag
cgaacacgaggaccttcttcgaagaagttgcatccatggagaagcaaagaataa
DBGET
integrated database retrieval system
