Arabidopsis lyrata (lyrate rockcress): 9310476
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Entry
9310476 CDS
T01578
Name
(RefSeq) cell division cycle 20.5, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9310476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9310476
03036 Chromosome and associated proteins [BR:
aly03036
]
9310476
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
9310476
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
9310476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_RIG_1st
Ge1_WD40
RMC1_N
WDR54
DUF1513
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
9310476
NCBI-ProteinID:
XP_002872290
UniProt:
D7M6A1
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MAQAWFPLEEHFLPRKLSKENLDRFIPNRSAMDFDYAPYALTEGRKPKVEVTSASRKAYM
NQLAETMNQNRTRILAFRNKPKALLSSNHSDSPHEQSKSVKRRRYIPQNSEKILDAPGIV
DDFYLNLLDWGSSNVLALALGHSIYLRDASSDSTSMLVTIDEEKGPVTSINWMQDGCTLA
IGLDNSEVQIWDSASNSQLRTLRGGHQTRVGSLAWNNHILTTGGRDGKIINNDVRIRSSI
VGSYLGHTDEVCGLKWSESGKQLASGGNDKVVHIWDRSLASSNSTRKWLQRFEGHTAATK
ALAWCPFQANLLATGGGVGDRTIKFWNTHTGACLNSVETGSQVCSLLWSNKERELLSSHG
FTQNQLTLWKYPSMLKIAELNGHTSRVLYMAQSPDGCTVASAAGDETLRLWNVFGVPPPK
TTKKAAPKAYLQIFSHVNCIR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcttggtttccacttgaagaacactttcttcctaggaaactttccaaggaa
aacctcgacaggttcataccaaatagatccgccatggatttcgactatgctccctacgct
cttaccgaaggaagaaaacctaaagttgaggtaacttcagcgtcaaggaaagcgtacatg
aaccaattggctgagactatgaatcagaatcgaacccggattctcgctttcagaaacaaa
cctaaagctctgctttctagtaatcactctgattctcctcatgaacaatctaaatccgta
aagcgtcgtagatacattcctcagaatagtgagaaaatcttggatgcacctggcattgtg
gatgacttctaccttaacttgttggactggggtagttctaatgtcttagccctagctttg
ggccactctatttacttgcgggatgcttctagtgattctacatctatgcttgtgactatt
gatgaagagaagggacctgtcacaagtattaactggatgcaagatggttgtactctcgca
attggtcttgacaactctgaagtgcagatttgggattctgcttcgaatagtcaactgaga
acattgagaggtggtcaccagacaagagtaggatcattagcatggaacaatcacatccta
acaactggaggaagggatggaaaaatcatcaacaatgatgtgaggatcagatcatcaatt
gtgggaagttacttgggtcacactgatgaggtttgtggtcttaagtggtcagaatctggg
aaacaattagcaagtggtggtaacgacaaggtagtacacatatgggatcgttctctcgca
tcctcaaactcaactaggaaatggttgcagaggtttgagggacatacagctgctacgaaa
gctcttgcatggtgtccattccaagcgaatttgcttgcaactggtggtggtgtaggagat
aggactattaagttctggaatacacacactggtgcttgcttgaattcagtagaaactggc
tctcaagtttgttcattgttatggagtaataaggaaagagagttgcttagttcacatggg
tttacacagaaccagcttacactttggaagtatccatctatgttgaaaatagctgaactc
aatggtcatacatcaagagttctttatatggcacagagtccggatggttgtactgtggct
tcagcagcaggagacgagactcttaggctttggaatgtttttggagtaccaccaccaaag
accaccaaaaaagctgctccaaaagcatatctgcagatattttctcatgtgaattgtatt
cgttga
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