Arabidopsis lyrata (lyrate rockcress): 9310527
Help
Entry
9310527 CDS
T01578
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9310527
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9310527
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9310527
03036 Chromosome and associated proteins [BR:
aly03036
]
9310527
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
9310527
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
9310527
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
9310527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
9310527
NCBI-ProteinID:
XP_020876655
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MVGSIVPGDMACLDADLLQLQEMSSFVLNSKPGFTQKLFDQWLSLPESHRQIGSLLKDAI
AGAPINVTGSASGSNSATIPSMFPAGSAPPLSPRSCGSPRTTKQRAPSNLGSTLKVVNEP
VKEPIPQFYFQNGRPPPSEIKEQCMFRINHFFYGHIDGLQIQEFKLVTREICKLPSFFST
SLFQKIDVNNTGFVTREAFIDYWVNGNMLIMDTTTQIFKILKQKDQSFIVKDDFKPLLKE
LLATHPGLEFLQSTPEFQERYAETVTYRIFYYINRSGNGRITFRELKRGNLIDAMLHADE
EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMRYGNHALTYRIVDRIFSQVA
RKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGIITRNEMQFFYEEQL
HRMECMAQEAVLFEDILCQMIDMIGPENESHITLRDLKGSKLSGNVFNILFNLNKFMAFE
TRDPFLIRQERENPTLTDWDRFAHREYIRLSMEEDVEDASNGSAEVWDDSSLEAPF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggttggttcgattgttcccggagacatggcttgtttggatgcagatttgttgcagctt
caagaaatgtcatcctttgttctgaattcaaaacctggattcactcaaaagctcttcgac
cagtggctttctcttcctgaatcccatcgacagattggatcattgcttaaggatgctata
gctggagctcctataaatgttactggaagtgcatcgggttcaaattctgccactatacca
tctatgtttcctgctggaagtgctcctccgctttcgccaaggagttgtggttcaccgcgt
acaaccaaacagagagccccttctaacttaggttctactctcaaagttgtcaacgagcct
gttaaagagccaatacctcagttttatttccaaaatggtcgcccaccaccaagtgagata
aaagagcaatgtatgtttagaatcaatcacttcttttatggtcacattgatggattgcag
atacaagaattcaaattagtcaccagagaaatctgcaagctcccatctttcttctccact
tcacttttccagaagatcgatgtcaataatacaggttttgttactagagaagcatttatt
gattattgggtaaacgggaacatgttgataatggatacaacgacccaaatcttcaagata
ctaaagcagaaagatcagagtttcattgtgaaggatgatttcaaaccactacttaaagaa
ctgttggcgacgcatcctgggctagagttcctgcaatccacacctgaatttcaagaaaga
tatgctgaaactgtcacctaccgaatattttactacataaatagatctggcaatggtcga
attacatttagggagcttaaacggggaaacttaattgatgctatgctacatgctgatgaa
gaagaagatattaacaaagtgttgagatacttctcatatgagcatttctatgtcatatac
tgcaagttctgggagctggatacggatcacgatttcctgattgacaaagaaaatcttatg
agatatggaaaccatgctcttacttaccggattgtcgacagaatattctcccaggttgct
aggaagttcactagcaaagttgaagggaagatggggtatgaggactttgtttatttcata
cttgcggaagaagataaatcttcagagcctagcctagaatattggtttaagtgcatagac
ttggatgcaaatgggattattacgcgaaatgagatgcaattcttttatgaagagcagttg
catcgaatggaatgcatggcgcaagaggctgttcttttcgaggatatcttatgtcagatg
attgatatgatcgggccagagaacgaaagccatataacgttgcgtgacctgaaaggctca
aaactctctggaaacgtcttcaacatcctttttaatctgaacaaatttatggcatttgaa
acacgggatccgttcctcattcgtcaggagcgtgagaaccctacattgacagactgggac
cgttttgcacatagagagtatattaggctttcaatggaagaagatgttgaagatgcatcc
aatggaagtgctgaggtttgggatgactcgtcactggaggctcccttctga
DBGET
integrated database retrieval system
