Arabidopsis lyrata (lyrate rockcress): 9310561
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Entry
9310561 CDS
T01578
Name
(RefSeq) isoamylase 3, chloroplastic isoform X2
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00500
Starch and sucrose metabolism
aly01100
Metabolic pathways
aly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
9310561
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
9310561
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Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
9310561
NCBI-ProteinID:
XP_002874494
UniProt:
D7M7P5
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MLTSPSSSSSSTFDSFSSNFSPVLTNAFSGFTIPMGLNFSRKVIGARVFSRKVKDRSTLK
VSCRRAQERVVEEEASTMTETKQLFKVSTGEVSPLGVSQVDNGINFALFSQNATSVTLCL
SLPQSGKDDLSDDGMIELVLDPSVNKTGDTWHICVEDLPLNNVLYGYRVDGPGEWQHGHR
FDHSILLLDPYAKLVKGRSSFGDSSQKFAQFYGTYDFESSPFNWGDDYKFPNIPEKDLVI
YEMNVRAFTADESSGMDPAIRGSYLGLIEKIPHLQDLGINAVELLPVFEFDELELQRRPN
PRDHMVNTWGYSTVNFFAPMSRYASGEADPVKASKELKEMVKALHSAGIEVILDVVYNHT
NEADDKYPYTTSFRGIDNKVYYMLDPNNQLLNFSGCGNTLNCNHPVVMELILDSLRHWVT
EYHVDGFRFDLASVLCRATDGSPLSAPPLIRAIAKDSVLSRCKIIAEPWDCGGLYLVGKF
PNWDRWAEWNGMYRDDVRRFIKGDIGMKGSFATRVSGSSDLYQVNQRKPYHGVNFVIAHD
GFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGDAHIKSLRTRQMKNFHLAL
MISQGTPMMLMGDEYGHTRYGNNNSYGHDTALNNFQWKELDAKKQNHFRFFSEMIKFRHS
HHVLKHENFLTQGEITWHEDNWGNPESKFLAFTLHDGVGGRDIYVAFNAHDYFVKALIPQ
PPPGKQWFRVADTNLESPDDFVSEGVAGVAETYNVAPFSSILLQSK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcttacttcaccttcttcttcttcttcttctacatttgattcattctcttccaatttc
tctccggtactcactaatgccttctctggcttcaccattcccatgggattgaatttcagt
aggaaagtgatcggagctcgagttttctctcggaaggttaaggatcgttcaacgcttaag
gtttcttgtcgtcgtgcacaagaacgtgtggttgaggaagaagcatctacaatgacggag
actaagcaattattcaaagtttctactggtgaggtatctcctcttggtgtgtctcaagtc
gacaatggaatcaattttgctttgttttctcagaatgctacttctgttacactctgctta
tcacttccccaaagtggtaaggatgatttgagtgatgatggtatgattgagttggttttg
gatcccagtgtcaacaagactggggatacttggcacatttgtgttgaggatttgcctctc
aataatgttctttatggttaccgtgttgatggtcctggtgaatggcaacatgggcatcgt
tttgaccatagtattttgcttttggatccctatgcaaagctagttaagggtcgcagctct
tttggagatagtagtcaaaagtttgctcaattttatggaacttatgactttgagagctcg
ccatttaactggggagatgactacaagttccctaacatacctgagaaggatcttgttatt
tatgaaatgaatgttcgtgcttttactgctgatgaatccagtgggatggacccagctata
agaggcagttacctcggtctcattgagaagatcccacaccttcaagatctgggtataaat
gcagtggagttattgccagtgtttgagtttgatgaactggagcttcagaggcgtcctaac
cctagggatcacatggttaacacatggggttactcgacagttaacttttttgctccgatg
agccgttatgctagtggtgaggcagacccagttaaagcttcaaaagagcttaaagaaatg
gtcaaagccttacattctgctggtatagaggtcattttggacgtagtttataatcatacg
aacgaagcagatgacaaatacccttataccacttcatttcgtggcatagacaataaggtt
tattacatgcttgatccaaacaaccaactgcttaacttttctggctgtgggaatacactg
aactgtaaccatcctgttgttatggaactaatactagatagcttaaggcactgggtcact
gaatatcatgtggatggtttccgatttgatcttgctagtgtgctttgccgagcaacagat
ggatctccactcagtgctcccccactcattagggcaattgccaaggattccgttctgtca
agatgtaaaataattgcagagccttgggattgtggaggattatatctagtcgggaagttt
ccaaattgggataggtgggctgagtggaatgggatgtaccgggatgatgttagaagattt
atcaagggtgacattggtatgaaaggaagctttgctactcgggtttcaggatcttccgat
ctttaccaggttaaccagcggaagccttaccatggtgtaaatttcgtgattgcacatgat
ggattcacattgcgagatcttgtatcatacaactttaagcacaatgaggccaatggagaa
ggaggaaatgatggatgtaatgacaatcatagctggaactgtggttttgaaggggaaact
ggtgatgctcacatcaagtctttacgtactcggcaaatgaagaattttcatttagctttg
atgatttctcagggaacaccaatgatgctaatgggagacgaatatggacatacgcggtat
ggtaataacaatagctacggacatgatactgctcttaacaatttccagtggaaagagctc
gacgcaaagaagcaaaaccatttcaggtttttttcggagatgatcaagtttcgacattca
caccatgtactcaagcatgaaaatttcctcacccaaggcgagattacatggcatgaagat
aattggggcaaccctgagagcaagttcctagctttcactctccatgacggtgtaggtggc
cgtgacatctatgtggcattcaacgcccacgattactttgtcaaggctctgattccacag
ccaccaccgggaaaacaatggttccgtgtggctgacacaaaccttgagtcaccggatgat
tttgtgagcgaaggtgtggccggcgtggctgagacctacaatgtggctccattctcttca
atccttctccagtccaagtaa
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