Arabidopsis lyrata (lyrate rockcress): 9310748
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Entry
9310748 CDS
T01578
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 6
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9310748
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
9310748
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9310748
03019 Messenger RNA biogenesis [BR:
aly03019
]
9310748
03041 Spliceosome [BR:
aly03041
]
9310748
Enzymes [BR:
aly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
9310748
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
9310748
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
9310748
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
9310748
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
9310748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
9310748
NCBI-ProteinID:
XP_020877942
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MDETLLDDIIRRLLATNNGRTVKQAQITEAEIRQLCLASKEVFLSQPNLLELEAPIKICG
DVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKVKYKFNFFLLRG
NHECASINRVYGFYDECKRRYNVRLWKTFTECFNCLPVSALIDDKILCMHGGLSPDIKSL
DDIKRIPRPIDVPDEGILCDLLWADPDREIEGWGENDRGVSYTFGADKVAEFLQTHDLDL
VCRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGALMSVDDSLTCSFQILKASEKKG
RFGFNNHVPRPGTPPHKGGKGR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacgagactttacttgacgacataatacggcgacttttagcgacgaataatggaagg
acggtgaagcaagcacagattactgaggcggagatacggcagctatgtttagcttccaag
gaagtttttctcagtcagcctaatctcctcgagcttgaggctcctatcaagatttgtgga
gatgttcatggtcagtttccagatctcctgcggttgtttgagtatggtggctatcctcca
gctgcaaattacttgtttctcggggactatgttgatcgtggtaagcagagcatagagact
atatgtcttcttcttgcatacaaggtcaaatacaagttcaacttctttcttctcagaggc
aatcacgagtgtgcttcaatcaatcgtgtatatggattctatgatgaatgcaaaagaaga
tataatgtccggttatggaaaactttcactgagtgtttcaactgtctgcctgtttctgct
ctcattgatgataagatcctctgcatgcatggtggactatcgcctgatattaagagctta
gatgacatcaagagaattcctcgtcctattgatgttcctgatgagggcattctttgtgat
ttgttatgggctgatcctgacagagagattgaaggctggggggagaatgacagaggtgtc
tcttatacatttggggccgacaaagtagctgagttccttcaaactcatgaccttgatctt
gtatgccgagctcatcaggttgtagaagatggatatgaattctttgcgaaaagacaactg
gtgacaatattctctgcacccaattactgtggcgagtttgacaatgctggcgcattgatg
agtgttgatgatagcttaacatgttcattccaaatccttaaggcatctgagaagaaagga
agatttggattcaacaaccatgttcctagaccaggaaccccacctcataagggtggaaaa
ggtcgttaa
DBGET
integrated database retrieval system
