Arabidopsis lyrata (lyrate rockcress): 9310815
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Entry
9310815 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-like protein 5
KO
K10609
cullin 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420
Nucleotide excision repair
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9310815
09124 Replication and repair
03420 Nucleotide excision repair
9310815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9310815
03400 DNA repair and recombination proteins [BR:
aly03400
]
9310815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9310815
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
9310815
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
9310815
TCR (transcription coupled repair) factors
Cul4-CSA complex
9310815
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9310815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Motif
Other DBs
NCBI-GeneID:
9310815
NCBI-ProteinID:
XP_020877686
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MMKRSLSPDSLSSAKSPKLFHHSPDDGGAEGNSYRLPYTLSDENLSCLPISQAREPPAIY
LDPALVKVRRDRKEGYLAKAWDLLKPAIKIILDDEYKKPGVLCFNTIFRAVKRACFGDPR
QVELIFDLVQHECEPHIAEVIQSLEKQSSGSDPSVFLPLVYNCWLDFKRKMMLVSDVXMY
QTLNGLTLWDVGQKLFHKQLSTAPQLQDQVITGILGLITDERLGKAANNTSGLLKNLMDM
FRGQWPDVYKNPFLDSTSKFYAEEAELVLQRSDISHYLKYVEGSFLAEEKKCEEHYYFFA
SCRSRQMKVLESQLLEAHAXFLEDGFKLLMDESLMDDLRRMYRLFSRVDSVDYIDRILRA
YILAKGEGARQEGSLQELHTSIDKIWHQCFDVYDLLDKTIRDCFEGFGLHVLGEFSDQEQ
WDCMED
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgctcgctcagccccgactctttatcctccgcgaagtcgccgaagctcttt
caccactcaccggatgatggaggagcagagggcaattcttatcgtcttccttatacctta
agcgatgaaaacctctcctgccttcctatatcccaggcgagggagcctcctgctatttac
ctggatcccgctcttgttaaagttagacgagacagaaaagaaggatacttagcaaaagct
tgggacttgctaaagccagcgatcaaaatcatcttagatgatgaatacaagaagcctggc
gttctctgtttcaatacgatttttagagctgttaagcgtgcttgctttggcgatcctcga
caagtagaactgattttcgatcttgtccagcatgagtgtgagccacacattgctgaggtt
atacagtctttagaaaagcaaagcagtggcagtgatccctctgttttcttgccactcgtg
tacaattgctggctagactttaaaaggaagatgatgcttgtgtctgacgtanccatgtat
cagactcttaatgggttgacattgtgggacgtgggccagaagcttttccataagcaactc
tccacggcccctcaacttcaagatcaagttattaccggcattttaggactcatcactgat
gaaagattaggcaaggctgctaacaacactagtggtctcctaaagaatcttatggacatg
ttccgtgggcagtggccagatgtgtataagaacccttttcttgattccacttctaagttt
tacgccgaggaagcagagctagtcctgcagcggtccgacatttcccactacttgaaatat
gtcgaggggagtttccttgcggaagagaaaaaatgcgaggagcattattacttctttgca
tcttgccggtcacgacaaatgaaagtcttagagagtcagctcctcgaggctcacgctntg
tttcttgaagatggttttaagctattaatggatgagagtctcatggatgaccttagaaga
atgtatcgtttgttctctagggtagattcggtggattatatagaccgcattctgagagcc
tacattttggcaaagggagagggagcgaggcaagaaggctccttgcaggagttgcatact
agcattgataagatatggcatcaatgctttgatgtgtatgatttattggataagaccatc
agagactgttttgagggttttggtcttcatgtgctgggtgaattttcggatcaagagcaa
tgggattgcatggaggattaa
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integrated database retrieval system
