Arabidopsis lyrata (lyrate rockcress): 9310927
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Entry
9310927 CDS
T01578
Name
(RefSeq) two pore calcium channel protein 1
KO
K16900
two pore calcium channel protein, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9310927
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
9310927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_FSTL1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
9310927
NCBI-ProteinID:
XP_002874860
UniProt:
D7M2M4
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MEDPLIGRDSRGGGADRVRRSEAITHGTPFQKAAALVDLAEDGIGLPEQILDQSSFGESA
KYYFIFTRFDLIWSLNYFALLFLNFFEQPLWCEKNPTPSCKDRDYYYLGELPYLTNVESI
IYEVITLAILLVHTFFPISYEGSRIFWTSRLNLVKVACVVILFVDVLLDFLYLSPLAYDF
LPFRIAPYVRVILFILSIRELRHTLVLLSGMLGTYLNIVALWMLFLLFASWIAFVMFEDT
QQGLTIFTSYGVTLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLIL
AVIYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEELNNYRTLP
KISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQKEEVPSLFENFPKIYHSALSQ
QLRAFVRSPNFGYAISFILVLNFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMAL
KIYSYGFENYWREGANRFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRL
IRLLLHVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQIFGGLVNAGNKQLFKT
ELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITIL
LLLNLVVAFVLEAFFAELDLEEEENCQGEDSQERRNRRRSAGTKSRSQRVDTLLHHMLGD
ELSKPECSTSDT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaagacccgttgattggtagagatagtcgtggtggtggtgcagatcgggttcgtcga
tcagaagctatcacgcatggtactccgtttcagaaagctgctgcactcgtcgatctggct
gaagatggtattggtcttcctgagcaaatacttgatcagtcgagtttcggggagtctgct
aagtactacttcatcttcacacgctttgatctgatctggtcactcaactatttcgctctg
cttttccttaacttttttgagcaaccactgtggtgtgaaaaaaaccctacaccgtcttgc
aaagacagagattactattacctgggagagttaccgtacttgaccaatgtagaatccatt
atctatgaggtgattaccctggctatactccttgtacatactttcttcccaatatcctat
gaagggtcccgaatcttttggacaagtcgcctgaatctagtgaaggttgcttgcgtggtg
attttgtttgttgatgtgctgcttgactttctatatctgtctccactggcttacgatttt
cttccttttagaatcgccccatacgtgagagttatcctattcatcctcagcataagggaa
cttcgacacacccttgtccttctgtctggaatgcttggcacatacttgaatatagtggct
ctatggatgttgttccttctatttgccagttggattgcttttgttatgtttgaggataca
cagcagggcctcacgatcttcacttcttacggtgtaactctttatcagatgtttattttg
ttcacaacatccaacaatcctgatgtctggattcctgcatacaagtcttctcgctggtct
tcggtgttcttcgtgctctacgtgctaattggggtctactttgtcacgaacttgattctt
gccgttatttatgacagtttcaaagaacagctcgcaaagcaagtatctggaatggatcaa
atgaagagaagaatgctggagaaagcatttggtcttatagactcagacaaaaatggggag
attgataagaaccaatgcattaagctctttgaagagttgaataattacaggactttgccg
aagatatcaaaagaagaatttggattgatatttgatgagcttgacgatactcgtgacttt
aagataaacaaggatgagtttgctgacctctgccaggccattgctttaagattccaaaag
gaggaagtaccatctctctttgaaaattttccgaaaatttaccattcggccttgtctcaa
caactgagagcctttgttcgaagccccaactttggctacgctatttctttcatcctcgtt
ctcaatttcattgctgttgttgttgaaacaacgcttgatatcgaagaaagctcggctcag
aagccatggcaggttgccgagtttgtctttggttggatatatgtgttggagatggctctg
aagatctattcatatggatttgagaattattggagggagggtgcaaaccgatttgacttt
ctagtcacatgggtcatagttattggggaaacggctaccttcataactccagacgagaac
actttcttctcaaacggagaatggatccggtaccttctccttgcaagaatgttgagactg
ataaggcttcttctgcacgtccagcgataccgagcatttattgcaacgttcataactctt
attccaagtttgatgccatatttagggaccattttctgcgtgctgtgtatctactgctct
attggcgtacagatctttggtgggcttgtgaatgctgggaataagcagctcttcaaaaca
gaattggctgaggatgactatctattgttcaacttcaatgactaccccaatggaatggtc
acactcttcaatctgctagttatgggtaactggcaagtatggatggagagctacaaagat
ttgacggggacatggtggagcattacgtatttcgtcagtttctacgtcatcactatttta
cttctgttgaatttggttgttgcttttgtcttggaggcgttctttgctgagctggatctt
gaggaagaagaaaattgtcaaggggaggattctcaagaaagaagaaaccgacgtcgatct
gcagggacaaagtctaggagtcagagagttgatacacttcttcatcacatgttgggtgat
gaactcagcaaaccggagtgctccacttctgacacataa
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