Arabidopsis lyrata (lyrate rockcress): 9310997
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Entry
9310997 CDS
T01578
Name
(RefSeq) syntaxin-42
KO
K08489
syntaxin 16
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9310997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9310997
Membrane trafficking [BR:
aly04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
9310997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Peptidase_S64
DUF2417
MCPsignal
DNA_pol_B_thumb
POTRA_2
M_C
Prominin
Motif
Other DBs
NCBI-GeneID:
9310997
NCBI-ProteinID:
XP_020876320
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSNDP
GPSSSDAFTIGMPPAWVDDSEEITYNIQKVRDKMSELAKAHSKALMPTFGDNKGIYREVE
MLTHEITDLLRKSEKRLQKLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKR
LQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQV
LGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVK
CATILLALCFIMIVLLILKNILF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcgaacgacggtgtatcggaaacacagggatgcgtgcaagagcgcg
cgtgctcctttatctttatcggcgtctgattcgttcggtggtccggtgatcgaaatggtt
agcggttcgttttctcggtcaaatcactcctcttatgctcctttgaattccaatgatcct
ggtccatcaagtagcgatgcattcacaattggtatgccaccagcttgggttgacgattct
gaggagataacatataatatacaaaaggtgcgagacaaaatgagtgaactagctaaggca
cattcgaaggcactcatgcctacatttggagataacaaagggatttatcgtgaagtcgag
atgctcactcatgaaattacagatttgttgaggaagtcagaaaagagattgcagaaatta
tctactagagggccttctgaagaatctaatctcagaaaaaatgtgcagcgttctcttgca
acagatcttcagaacctttccatggagctccgcagaaaacagtctacttatttaaaacgt
ctgcagcagcagaaagagggtcaggatgaagtagatttagagtttaacgtgaatggaaag
atgtcgagactggatgaagaggatgaacttggtgggatgggtttcgatgaacaccagaca
atcaagttgaaggaagggcaacatgtctcagcggaaagggaacgagagatacaacaggtt
ctgggttccgtgaacgaccttgcacaaataatgaaagacttatcagcccttgtgattgac
cagggcacgattgttgatcgtatagactacaatgtccaaaatgtttctacgtcggttgag
gaaggctataaacaactacaaaaggcggagagaacacagagagaaggagcaatggtgaaa
tgtgctacgatactccttgcactctgtttcataatgattgttcttttaatccttaagaat
attttgttttag
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integrated database retrieval system