KEGG   Arabidopsis lyrata (lyrate rockcress): 9310997
Entry
9310997           CDS       T01578                                 
Name
(RefSeq) syntaxin-42
  KO
K08489  syntaxin 16
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    9310997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9310997
Membrane trafficking [BR:aly04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    9310997
SSDB
Motif
Pfam: SNARE Syntaxin_2 Peptidase_S64 DUF2417 MCPsignal DNA_pol_B_thumb POTRA_2 M_C Prominin
Other DBs
NCBI-GeneID: 9310997
NCBI-ProteinID: XP_020876320
LinkDB
Position
Unknown
AA seq 323 aa
MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSNDP
GPSSSDAFTIGMPPAWVDDSEEITYNIQKVRDKMSELAKAHSKALMPTFGDNKGIYREVE
MLTHEITDLLRKSEKRLQKLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKR
LQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQV
LGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVK
CATILLALCFIMIVLLILKNILF
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcgacgaggaatcgaacgacggtgtatcggaaacacagggatgcgtgcaagagcgcg
cgtgctcctttatctttatcggcgtctgattcgttcggtggtccggtgatcgaaatggtt
agcggttcgttttctcggtcaaatcactcctcttatgctcctttgaattccaatgatcct
ggtccatcaagtagcgatgcattcacaattggtatgccaccagcttgggttgacgattct
gaggagataacatataatatacaaaaggtgcgagacaaaatgagtgaactagctaaggca
cattcgaaggcactcatgcctacatttggagataacaaagggatttatcgtgaagtcgag
atgctcactcatgaaattacagatttgttgaggaagtcagaaaagagattgcagaaatta
tctactagagggccttctgaagaatctaatctcagaaaaaatgtgcagcgttctcttgca
acagatcttcagaacctttccatggagctccgcagaaaacagtctacttatttaaaacgt
ctgcagcagcagaaagagggtcaggatgaagtagatttagagtttaacgtgaatggaaag
atgtcgagactggatgaagaggatgaacttggtgggatgggtttcgatgaacaccagaca
atcaagttgaaggaagggcaacatgtctcagcggaaagggaacgagagatacaacaggtt
ctgggttccgtgaacgaccttgcacaaataatgaaagacttatcagcccttgtgattgac
cagggcacgattgttgatcgtatagactacaatgtccaaaatgtttctacgtcggttgag
gaaggctataaacaactacaaaaggcggagagaacacagagagaaggagcaatggtgaaa
tgtgctacgatactccttgcactctgtttcataatgattgttcttttaatccttaagaat
attttgttttag

DBGET integrated database retrieval system