Arabidopsis lyrata (lyrate rockcress): 9311059
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Entry
9311059 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9311059
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9311059
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9311059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-C3HC4_2
zf-RING_16
RINGv
zf_RING_Vps8
zf-C3HC4_3
Succ_DH_flav_C
Motif
Other DBs
NCBI-GeneID:
9311059
NCBI-ProteinID:
XP_002874992
UniProt:
D7M4X3
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAMAEENAAGNAICSICYEDLKPVVENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPI
CKQKCSLKDPCRLYFQSSGNQITSEKVVEIEEDPVLLRGEVKRLQGKIQNLTSALEAKKK
ENVQVSDKLHQCNEQLKEDKVKRWEALQEISTTQHLLKLKSEECFQLSSQCAKLQERTMA
LAKELAALKLVSDLSLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKCNQ
LGRGEARSSEKLEKALEKIDKLKKQMRELELITEARENRALRDINVSKNCSYRELSEPAT
ESMASFRMLPSDNKMEKISTPPGKLEENDGFTNQGSCLRGREGSFVSRTDSVIDVDDDVP
ETTISGIRHSDTNIEEKCDNPLVKNIKFNIRENPTSSVSPHSNGAGNIWQSNRNLGRWSK
HGERNETTPSLGGSGPSKDDLIAIGPDGKGGRIKVLRSKPQISNANTSSGSSGKRFKLGT
KTSGSSSQGCLQIEHYFGKTNR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctatggcagaagaaaacgcggcggggaatgctatttgttcaatctgctacgaagat
ctcaaaccggtggttgagaatctgcaatcaatctccgcttgtggccatgtctttcacgaa
ctttgtttgcagcaatggtttgagtactgcccgagtacgaacaagcgaaattgtccgatt
tgtaagcagaagtgctctctaaaggatccttgccgactttactttcagtcttccgggaat
caaatcacctcggaaaaagtcgttgaaatcgaagaagatccggttttgttgagaggagaa
gtgaagcggctccaagggaagatacaaaatcttacttcagctctggaggcgaagaaaaag
gagaatgttcaagtctctgataagttgcatcaatgcaatgaacaattgaaggaggataaa
gtgaaaaggtgggaggctcttcaagaaatatcaacgactcagcacttgcttaagttaaaa
tctgaggaatgtttccagcttagttcacagtgtgctaagctacaggagagaactatggct
cttgccaaggagctcgcagcgcttaaattggtttctgatttaagcttggaggaagatgat
gttctgaagctagccttgttggggaataacgctaagaccaaagatacaatagacacacta
gtcaagtccttggttatccgaaatagaagctataaggaattgctagccaagtgcaatcag
ctgggcagaggcgaagcgcgatcgtctgagaaacttgaaaaagctttggaaaagatagat
aaactaaagaagcaaatgagggaacttgagttgataactgaagcgagagagaacagagct
ctacgggacataaacgtttcaaagaattgcagttacagagaattatccgagcctgcaacc
gagagcatggcttctttcagaatgttgccatcagacaacaaaatggagaaaatctccaca
ccacctggtaaattagaagaaaatgatggctttaccaaccaaggatcatgcttaagggga
agagaaggctcctttgttagcagaacagactcagttatagatgtagatgatgatgttccc
gaaaccaccatttctggcatcagacattcggatactaatattgaagaaaaatgtgataat
cccctggtgaagaatataaagttcaacatcagagaaaacccgacatcatcagtctcacct
cacagcaatggtgctggaaacatttggcagtcaaatcgaaaccttggtagatggagcaaa
catggagagagaaacgaaacaactccatcactaggaggttctggtccaagcaaagatgat
ctgatcgctattggacctgatggtaaaggtggaagaatcaaagtgctgagatctaaaccc
caaatttctaacgccaatacaagctcaggaagtagtggtaagagattcaagcttggaact
aaaacaagtggctcgtcctctcaaggttgtctgcagatcgaacactattttggcaaaact
aatcgctaa
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integrated database retrieval system
