Arabidopsis lyrata (lyrate rockcress): 9311182
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Entry
9311182 CDS
T01578
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9311182
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
9311182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
9311182
NCBI-ProteinID:
XP_020881074
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MKRDFDEISEEEWSQHSFNPSRVLKRPRTPKKTRPVNPSPPIESFAFRRPSTAMTIESNN
SSDGDCVEIEDLGDSDSDVKIVNGEDLLLEDEEEVEETKVVMRAARVGRRFVIEDEEASD
DDDEAESSASEDEFGRGGGGGGGRRGEDEDVVGKALQKCAKISADLRKELYGTSSGVTTC
DRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILAD
EMGLGKTIQAITYLTLLNRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAAR
AAYSRELNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALK
DKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVDLKKLLNA
EDTELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMEKKQEDAYKEAIEEYRAAS
QARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPI
GAFGFECSLERVIEEVKGYNDFRIHQLLFQFGVNDTKGTLSDKHVMLSAKCRTLAELLPS
MKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFAC
LLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDE
NIYEIAKRKLVLDAAVLESGVHVDDNGDTPEKTMGEILASLLMG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgatttcgacgaaatctccgaggaagagtggtctcaacactcttttaaccct
tcgcgagttcttaaacggccacggactccgaagaagactcggccggtgaatccatcgcct
ccgattgagtcttttgcgtttaggagaccttcgacggcgatgacgattgagagtaataat
agtagcgatggtgattgtgttgagattgaggatttaggagattcggattcggatgtgaag
attgtgaatggtgaggatttgttgttggaggatgaggaagaagttgaggagacgaaagtt
gtgatgcgagctgcgagagttggtaggagatttgtgattgaagatgaagaagcgagtgat
gatgatgatgaggctgagagtagtgctagtgaggacgaatttggaagaggaggaggaggt
ggtggaggaaggagaggagaagacgaagatgttgttgggaaggcattgcaaaagtgtgct
aaaatctcagccgatcttcgaaaggagctttatggtacatcttctggggttactacttgt
gacagatactctgaagttgaaacttctactgtgaggattgttacacagaatgatattgat
gatgcttgtaaagcagaggattctgattttcagcctatactcaagccttaccagttagtt
ggtgttaactttcttcttctgttgtataagaaaggaattgaaggagccattctagctgat
gagatgggtcttggaaagaccattcaggcaataacatatttaaccctcctaaatcgctta
aacaatgaccctggtcctcatttggttgtatgccctgcctctgtcttggaaaactgggag
agagagctcagaaaatggtgtccatcgtttactgtacttcaataccacggggctgcaaga
gcagcctactcaagagaattgaattctttgtccaaagctgggaagccaccgccattcaat
gtgcttcttgtgtgttactctctgtttgaacggcatagtgaacaacagaaagatgaccga
aaagtactaaaacgatggcgttggagctgtgttttgatggatgaagcccatgctttaaaa
gataagaacagttacaggtggaaaaatttgatgtctgtggccagaaacgcaaaccagcgt
cttatgcttacaggaacgcctctacaaaatgatttacatgaattatggtcgctgttggag
ttcatgttgcctgatatatttactacagagaatgttgacttgaagaagttgttgaatgca
gaagatactgagttgattactcgaatgaaatctattttaggtcctttcatcttgaggcgt
ttaaaatctgatgtcatgcagcaacttgttccgaagatacagcgggttgaatatgtatta
atggagaaaaagcaggaagatgcatataaagaagccatagaggagtatcgtgctgcttct
caagcacggcttgtgaagctttcatcaaaatccttgaattctttagccaaggcacttcca
aagcgtcaaatttcaaactattttactcaatttcggaagatcgcaaatcatccattgtta
attaggcggatatacagcgatgaggatgtcattcgcatcgccaggaaattgcacccaatt
ggtgcatttggatttgaatgttccttggagagagtgatagaggaagttaagggttacaac
gatttccgtatccaccagcttttgttccaatttggagttaatgataccaaaggaactctc
tctgacaaacatgtcatgctctcagcaaaatgtcggacattagctgagcttctcccttca
atgaagaaatccggccatcgtgttctaatatttagtcaatggacatcgatgctcgatatc
ttagaatggacactcgatgtaatcggcgttacataccgaagacttgacggcagtactcaa
gtcacagatagacaaaccatagtcgacacattcaacaacgataagtcgatattcgcatgt
ctcttgtcaactcgagcaggtggacaaggtctgaatttaaccggagcagatacggtcatt
attcacgatatggattttaatccacagattgatcgtcaagctgaagatcgttgccatcgt
attggtcaaacaaaaccagtcactatcttcagactggtgacgaaatcgacggttgatgag
aacatctacgagatagcaaagcggaaacttgttcttgatgcggcggttctagagtctgga
gttcacgtagatgacaacggagacacacctgagaaaaccatgggagagattctcgcttct
cttctcatgggataa
DBGET
integrated database retrieval system
