KEGG   Arabidopsis lyrata (lyrate rockcress): 9311261
Entry
9311261           CDS       T01578                                 
Name
(RefSeq) SKP1-like protein 15
  KO
K03094  S-phase kinase-associated protein 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03083  Polycomb repressive complex
aly04120  Ubiquitin mediated proteolysis
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9311261
   04120 Ubiquitin mediated proteolysis
    9311261
  09126 Chromosome
   03083 Polycomb repressive complex
    9311261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9311261
   04121 Ubiquitin system [BR:aly04121]
    9311261
   03036 Chromosome and associated proteins [BR:aly03036]
    9311261
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    9311261
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     9311261
   Cul7 complex
     9311261
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     9311261
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     9311261
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 9311261
NCBI-ProteinID: XP_002875193
UniProt: D7LQE9
LinkDB
Position
Unknown
AA seq 199 aa
MSSNMIVLTSSDGESFQVEEVVARKLQIVGHMLEDDCVINAIPLQNVTGKTLSMVLEYCK
KHVDDVVADDVVPESTEGDGASEEPKKKVDDVVVPKSSEEDDASEEAKKKLDAWDAKFMK
DLNTETIFSIILAANYLNVKGLLDLTSQTVADYIKDMTPEEVRELFNIENDFTPEEEEAI
RKENAWTFEAASAQEVPKP
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtcttcgaacatgattgtgttgactagctccgatggcgagtctttccaggttgaagaa
gtggttgcaagaaagctgcagatcgtaggacacatgctcgaagacgactgtgttattaac
gcaatccctcttcaaaacgttaccggaaagactctctccatggttctcgagtattgcaag
aaacacgtcgacgatgtggtcgctgatgatgtcgtgcctgaatcaacagaaggagatggt
gcatctgaggagccgaagaagaaggtcgatgatgtggtggtgcctaaatcatcagaagaa
gatgatgcatctgaggaggcgaagaagaagctcgatgcttgggacgcaaagttcatgaag
gatctcaatactgagacgatcttcagcatcattctcgctgctaactatctcaacgtcaaa
ggtctacttgatctcactagccagaccgttgcagattacatcaaagatatgacgccagag
gaagttcgagaactctttaacatcgagaatgatttcacacctgaagaagaagaagcgatt
cgcaaggagaacgcttggacttttgaggctgcttcagcacaagaagttccaaaaccctag

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