KEGG   Arabidopsis lyrata (lyrate rockcress): 9311263
Entry
9311263           CDS       T01578                                 
Name
(RefSeq) SKP1-like protein 16
  KO
K03094  S-phase kinase-associated protein 1
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03083  Polycomb repressive complex
aly04120  Ubiquitin mediated proteolysis
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9311263
   04120 Ubiquitin mediated proteolysis
    9311263
  09126 Chromosome
   03083 Polycomb repressive complex
    9311263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9311263
   04121 Ubiquitin system [BR:aly04121]
    9311263
   03036 Chromosome and associated proteins [BR:aly03036]
    9311263
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    9311263
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     9311263
   Cul7 complex
     9311263
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     9311263
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     9311263
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 9311263
NCBI-ProteinID: XP_002875195
UniProt: D7LQF1
LinkDB
Position
Unknown
AA seq 168 aa
MSSNKIVLTSSDDESFEVDEAVARKLQIIAHMIDDDCADKAIPLQNVTGKILAVVIEYCK
KHVNDVDDSDVVEEISENVDEEAKKELVTWDAEFMKDIDMETMFQLLLAANYLNVKSLLD
LTSQTIADYIKDKTPQEVREIFNIENDFTPEEEEEIRKENEWAFEDLN
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtcttcgaacaagattgtgttgactagctccgatgatgaatctttcgaggttgacgaa
gcggtggctcgtaaactgcagatcatagcgcacatgattgatgacgactgcgccgataaa
gcaatcccgcttcaaaacgtcactggaaagatcctcgctgtggttatcgagtattgcaag
aaacacgttaatgatgttgatgatagtgatgttgttgaagaaataagcgaaaatgtagac
gaggaagccaagaaagagctcgtgacttgggacgcagagttcatgaaagatattgatatg
gaaacaatgttccaactccttctcgctgctaactatctcaacgtcaaaagtcttcttgat
ctcactagccagaccattgcagattacatcaaagataagacgccacaggaagttcgagaa
atctttaacatcgagaacgatttcacacctgaggaagaagaagagattcgcaaggagaac
gaatgggcttttgaggatctaaattaa

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