Arabidopsis lyrata (lyrate rockcress): 9311469
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Entry
9311469 CDS
T01578
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9311469
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
9311469
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Meiosis-specific proteins
Others
9311469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
IMS_HHH_1
HHH
AAA_22
Motif
Other DBs
NCBI-GeneID:
9311469
NCBI-ProteinID:
XP_002877068
UniProt:
D7LPJ8
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MDTHTLKSVSDLPGNFRSAFSFRYFNSLQSECFPLCFHSDINMVISAPTGSGKTVLFELC
ILRLLSKSIAKEGMFLHAKGALKAVYISPSKALVQEKLRDWNQKFNSWGISCLELTGDNE
TYSTRNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALVLIDEVHLLNDPRGAALEA
IVSRIKILSSNHELRSSPLASVRLLAVSATIPNIEDLAEWLKVPTAGIKRFGEEMRPVKL
TTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMT
YGYSNPFIKSREQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGD
IQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQMCGRAGRPPFDDTG
MVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTTEIVQLTISDITRAIEWMKCSYL
YVRMKKNPENYAIKKGIPKDQVEKHLQELCLQKINELSQYQMIWTDTDGFVLKPEEPGRL
MTKYYLKFDTMKYIINAPTGYSLDEALHIVCRAEEISWIQLRRNEKKTLNDVNADKEGRL
RFHINDNKGKRKKRIQTREEKLFVLANDWLTGDPSVHDLSMTQDANSICSNGSRIARCMK
EYFIYKKNYKGTISSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEALS
EADPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIKVQEVDCQKQGISKLAVTLTRLSQPL
QSTKRHYADMIVGSEEENRIHFHEKIRMEDFSSPYNVTILLERPHQQAKVTVKADLIFEE
YIGIDLHETLLLKKANNNKINYKSENRLPHYYPPMVAACVVDDNPVTSGPSNRKDKKDDM
PSFKLIDEDSEEEKEPYVTMEEDDCVIINEHTVFDHIREKAKCFPSLNTLNPTTSPASGK
SNLKRKSLVDKSPELDPLFQYDSVFDLPTNTKDVKQSAQQITKPGYASFAEKTETERPFS
DETIFNYIRKRSKNSPVLATSKLEDPITISSQEGRNAEISPYRAYGLLVSPATKKPRITS
DAPSEILPFDISMVKRSGTNLEQEKRLCSTFAGKSNVSDSFLGFKSIFSFL
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatacacacacgctaaaatccgtctcagatttgcctggaaatttccgttcagctttt
agtttcagatactttaactcgctgcagagtgagtgttttccactgtgcttccactccgat
atcaacatggttatttcagcgccaacgggaagtggtaaaaccgtactttttgagttatgc
attttgaggctcctttcaaagtccatagctaaggaaggaatgtttctccatgctaaagga
gctcttaaagcagtttacatatctccgtccaaggctttagttcaggagaagctgcgtgat
tggaatcaaaagtttaattcatggggaatcagttgtttggagctgactggtgataatgaa
acctacagcacaaggaatatacaagacgcagatataatcttgactacacctgagaaattt
gatgcagtgagccgttatcgcgttaccagtggaggcttaggtttcttcagtgatattgcg
cttgtgctcattgatgaagttcacctactgaatgatccgcgtggagctgctcttgaggca
atagtcagtagaataaagattctttctagcaatcatgaactaaggtcaagtcctctagcc
tccgtgcgtcttctggctgtctcagctactatcccaaacattgaggatttagctgaatgg
ctcaaggttcctactgcaggaattaagaggtttggcgaagaaatgagacctgttaagttg
acaactaaagtttttggttatgctgctgccaagaatgacttcctctttgaaaagcgcctt
caaaactatatttatgacattttaatgcaatactcaaaaggaaaatctgccttagttttc
tgctcgacacgaaaaggcgctcaagaggctgcacaaaagcttgctcagactgcaatgacc
tatggttactcaaatccatttattaaaagcagagaacagctggaaagattaagggaggct
tcgccaatgtgcagtgacaaacaaatgcaatcatatatcctccaaggcgttggttatcac
aatggtggactttgccaaaaggaccgcagcctcgtagaagggctcttccttaatggagat
atccaggttatctgcacgaccaacactcttgcccatggaatcaacctgcctgcacataca
gtcgtcataaaatcaactcaacatttcaacaaggaaaaaggtcactacatggaatatgat
cgttccacactactacagatgtgtggcagggctggtcggcctccatttgatgacacggga
atggttattattatgaccagaagagagacggtccatctgtatgagaatctcttgaatgga
tgtgaggttgttgaatcacaattgctgccatgcttaatagagcacctaaccacagaaata
gttcaacttactatctctgacattacacgggcaattgagtggatgaagtgctcatacctg
tatgtcagaatgaaaaagaatccagagaattatgctattaagaaaggaattccgaaagat
caagtagagaagcatttgcaagagctttgccttcagaagatcaatgagctttcacaatat
cagatgatctggactgacacagacggttttgttttgaaaccagaagagcccggaaggctg
atgacaaagtattatctaaagtttgacacaatgaagtacattattaatgcgccaacgggc
tatagcttggatgaggctcttcatattgtgtgtcgtgctgaagagatatcttggatacag
ctcagacgcaatgagaagaagaccttaaatgatgtaaatgcagataaagaagggcggctc
agattccacatcaacgataataaaggaaagcggaaaaaacgcatccaaaccagagaagag
aaactatttgtgcttgcaaatgattggttgactggggatccttcagtgcatgatttatcc
atgactcaggatgctaactctatttgctcgaatggatccagaatagcgagatgcatgaaa
gagtactttatatacaaaaagaattataaaggaacgattagctcaactcttctggcaaaa
tcactctatcaaaagctgtgggacgacagtccatatttgttgaaacaattgcctggcatt
ggaatggttactgcgaaggcacttcattcaatgggagtcaggtcatttgaagctctttct
gaagctgatccacgaaggatagagattgttaccggtcgaaaatatcctttcggaaatacc
atcaaggagtctctatcatccctacctccaaaagttgaaatcaaggtccaggaagttgac
tgccagaagcaagggatatctaaattagcagtcacattgacacggctatcacaacctctc
caatccacaaaacgccattatgctgacatgattgttggttcagaggaagagaatcgtatt
cactttcatgagaaaataagaatggaggacttctccagtccatataacgtaaccatactc
ctggaaaggcctcatcaacaagcaaaggtgactgtgaaggctgatctcatcttcgaagaa
tacattggtattgacctccatgaaacacttctactcaagaaggcaaacaacaacaaaata
aactacaaaagcgaaaacaggctgcctcactattatcctcctatggtggctgcctgcgta
gtagatgacaacccagttacatctggaccttcaaaccgaaaggataaaaaagatgatatg
cctagtttcaaactcatagatgaggattcagaagaagagaaagaaccctatgtgacgatg
gaagaagatgactgtgtcattatcaatgaacatacagtctttgaccacatacgtgaaaaa
gcaaagtgttttccttcattgaacactttgaatccgaccacctctccggcatcaggaaaa
tcaaatctgaaaaggaaaagcttagtggacaagtctcctgaactggatcctctatttcag
tatgattctgtctttgacttacctacaaatactaaagacgtcaaacaaagcgcacagcaa
attactaagccgggttatgcaagctttgcagagaaaactgaaacagaaaggccattctca
gatgaaacaatattcaactacataaggaaaaggtccaagaattccccggtcctcgccaca
tcaaaactcgaggatcccataaccatttcttctcaagaaggaagaaacgcagagataagt
ccgtatagagcttacggattattggttagtcctgctactaaaaagccaaggatcacatct
gatgcaccttcagaaattttgccctttgatatctcgatggtgaagagaagtggcacgaac
ttagagcaggagaaaagactctgctcgacatttgcaggtaagtccaatgtctctgattct
tttcttggatttaaaagtatcttctcttttctgtga
DBGET
integrated database retrieval system
