Arabidopsis lyrata (lyrate rockcress): 9311516
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Entry
9311516 CDS
T01578
Name
(RefSeq) ABC transporter B family member 15
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9311516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9311516
04147 Exosome [BR:
aly04147
]
9311516
04090 CD molecules [BR:
aly04090
]
9311516
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9311516
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9311516
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9311516
CD molecules [BR:
aly04090
]
Proteins
9311516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_30
AAA_16
AAA_22
AAA_21
AAA_15
RsgA_GTPase
Zeta_toxin
AAA_23
AAA
nSTAND1
AAA_28
DEAD
AAA_19
DLIC
Motif
Other DBs
NCBI-GeneID:
9311516
NCBI-ProteinID:
XP_020881129
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MKMVKEEEKESGRNKMKSFGSVRSIFMHADGVDWLLMSLGLIGAVGDGFTTPLVLLITSK
LMNNLGGSSFNTDTFMQSISKNSVALLYVACGSWVVCFLEGYCWTRTGERQTARMREKYL
RAVLRQDVGYFDLHVTSTSDVITSVSSDSFVIQDVLSEKLPNFLMSASTFVGSYIVGFIL
LWRLAIVGLPFIVLLVIPGLMYGRALISISRKIREEYNEAGFVAEQAISSVRTVYAFSGE
RKTISKFSTALQGSVKLGIKQGLAKGITIGSNGITFAMWGFMSWYGSRMVMYHGAQGGTV
FAVTAAIAIGGVSLGGGLSNLKYFFEAASVGERIMEVINRVPKIDSDNPDGHKLEKIRGE
VEFKNVKFVYPSRLETSIFDDFCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPLAGEI
LIDGVSIDKLQVKWLRSQMGLVSQEPALFATTIKENILFGKEDASMDDVVEAAKASNAHN
FISQLPNGYETQVGERGVQMSGGQKQRIAIARAIIKSPTILLLDEATSALDSESERVVQE
ALENASIGRTTILIAHRLSTIRNADVISVVKNGHIVETGSHDELMENLDGQYATLVHLQQ
IEKQDSDVNINVSVQMGPISDPSKDIRSSSRVSTLSRSSSANSVTGPSIVKNLSEDNKPQ
LPSFKRLLAMNLPEWKQALYGCISATLFGAIQPAYAYSLGSMVSVYFLTSHDEIKEKTRI
YALSFVGLAVLSFLINISQHYNFAYMGEYLTKRIRERMLSKVLTFEVGWFDRDENSSGAI
CSRLAKDANVVRSLVGDRMALLVQTVSAVTIAFTMGLVIAWRLALVMIAVQPVIIVCFYT
RRVLLKSMSKKAIKAQDESSKLAAEAVSNVRTITAFSSQERIMKMLEKAQESPRRESIRQ
SWFAGFGLAMSQSLTSCTWALDFWYGGRLIQDGYITAKALFETFMILVSTGRVIADAGSM
TTDLAKGSDAVGSVFAVLDRYTSIDPEDPDGYETERITGQVEFVDVHFSYPTRPDVIIFK
NFSIKIEEGKSTAIVGPSGSGKSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRQHIA
LVSQEPTLFAGTIRENIIYGASDKIDEAEIIEAAKAANAHDFITSLTDGYDTYCGDRGVQ
LSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGRTSVVIAHRLS
TIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFSLVSLQTTSG
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggttaaagaagaggagaaagagagtgggaggaacaagatgaagagttttgga
agcgtaagatcgatattcatgcacgcggacggtgtagattggttgctgatgagcttaggg
ttaatcggagccgtcggtgatggcttcacaactcctcttgttcttctcatcaccagcaag
cttatgaacaatcttggtggttcctctttcaacactgataccttcatgcaaagcatctcc
aagaattctgtagctttgctttatgtggcttgtggatcttgggttgtttgtttccttgag
ggatattgttggacaagaacaggggagagacaaacagcaagaatgagagaaaagtactta
agggcagtgttaagacaagatgtgggttactttgatcttcatgtcacaagcacttctgat
gttattaccagtgtctctagtgacagctttgtcatccaagacgtcctcagtgaaaagtta
ccaaattttttgatgagcgcatcaacgttcgttggaagctacatagtcggatttatcttg
ctatggagactggccatagttggtttacctttcattgtcctcttagtgatcccgggtctt
atgtacggacgagccctcataagcatttcaaggaagatacgcgaagagtacaatgaagct
ggtttcgtagctgagcaggcgatctcttcggtgcgaaccgtctatgcgttttctggggag
aggaagacaatatccaagttctcgaccgcgcttcaagggtccgttaagctagggattaaa
caagggcttgctaaggggatcaccattggaagcaatggaatcacttttgccatgtggggg
ttcatgtcttggtatggaagccggatggtcatgtaccatggtgctcagggtggtaccgtc
tttgcagttactgccgctattgctatcggtggcgtatcacttggtggtggtttgtctaat
ctcaagtacttctttgaggcggcttcagttggggagcgaatcatggaagtgataaacaga
gttcccaagattgattcggacaatccagatggccacaagttggagaaaattagaggagaa
gtcgagtttaagaacgtaaaatttgtgtatccatcgaggcttgaaacatcgatctttgac
gatttttgtctgagagttccttccgggaaaactgtggctttggtgggaggaagcgggtca
ggaaaatcgaccgtgatctcacttttgcaaaggttttatgacccgctagcaggagagatt
ctcatagatggtgtatccattgataagctacaagtgaagtggttgagatcacaaatgggt
ctagttagccaagaacctgcacttttcgccacaacgataaaggaaaacatattatttggt
aaagaagatgcatccatggatgatgttgtggaagctgccaaagcctcaaatgctcataat
ttcatttctcagttacctaatggctacgaaactcaggttggtgagagaggagtgcaaatg
tcaggaggacaaaagcagaggatcgcaatcgcacgtgcaataatcaaatcaccaacaatt
cttcttctagacgaggcaacaagcgcgttagactctgaatccgaacgagtagtccaagaa
gccttagaaaatgcctcgattggtcgtacaactattctgatcgctcaccgtctctctacc
atccgtaatgctgatgttatctccgtggttaagaacggtcacattgtggaaactggatca
cacgatgagctaatggaaaacttagatggtcaatacgctacacttgtccacttacaacag
attgaaaaacaagactcagatgtaaacatcaacgttagtgtgcaaatgggtccaatctcg
gatccgagcaaagatataagaagtagttctagagtgtcgactcttagccgttcaagctct
gctaactcggttacaggtccaagcattgtgaagaatctttctgaagataacaagccgcaa
ctaccgtcgtttaagagactattagcaatgaatctaccggaatggaaacaagcgttgtat
ggttgcataagtgcaaccttgtttggagccatacagccagcgtacgcatattctttaggg
tcgatggtatccgtgtatttcctgacaagccacgacgagattaaggagaaaacaaggatc
tatgcattatcttttgttggcctagccgttctttctttcttgatcaacatcagtcaacac
tacaactttgcatacatgggtgaatatttgactaaacgtatccgagaacgaatgctctct
aaggtgctaacatttgaggtcggttggttcgatagagatgagaactcaagcggggccatt
tgctctagactcgcaaaagatgctaatgtggtgagatcgttggtaggtgatcggatggca
ttattggtacaaaccgtatccgctgtaaccatagctttcacgatgggattggtcatcgct
tggaggttagcacttgtgatgatagcggtgcaaccggtgattattgtttgcttctacact
cgccgtgttttactcaagagcatgtcgaaaaaagcaatcaaggctcaggatgaaagtagc
aaactagcagcagaggctgtttccaacgtccgaactattacagctttttcatcacaagaa
cgtatcatgaaaatgctggaaaaggcccaagaaagtccgcggagagaaagcattcgtcag
tcatggtttgcagggttcgggctcgcgatgtcgcagagtctcacgtcgtgcacgtgggct
ttggatttctggtacggtggcagattgatccaagatgggtacatcacggctaaagctttg
ttcgagacgtttatgatcttggttagtactggtcgagtcatagccgacgctggaagcatg
accacggatctagctaaaggttcagacgcggtcggctcggttttcgctgtgttggatcga
tacacgtcgattgatccggaggatccagatggatatgaaacggaaagaataacgggtcag
gttgaatttgttgacgtacatttctcgtacccgactagaccggatgtgattatattcaag
aacttctccattaagatcgaagaggggaagtccaccgcgattgttggtccaagcgggtca
ggtaaatctactatcattggcttgatagagcggttctatgacccgttaaagggtattgta
aaaatcgatggtcgcgatataaggtcatatcatttgagatcacttcgtcaacacatagct
ttggttagtcaagaaccaacattgtttgctgggacaatccgagagaacatcatatatgga
gcctcagataaaattgacgaagcagagataatcgaggcggcgaaagcagcgaatgctcac
gatttcatcacatctttaacggacggctacgacacatactgtggagacagaggagtacaa
ttgtctggtggtcaaaaacagaggatcgctatcgctagagcggttttgaaaaacccgtca
gtgttgcttctagacgaagcgacaagcgctttggacagccaatcggaacgtgtggtgcaa
gatgcgctcgagcgtgttatggtagggaggacgagtgtggtgattgcacataggctaagc
acaatccaaaactgtgacgcaatcgctgttttagacaaaggcaaactcgtggaacgtggg
actcactcttccttgttgtcaaaaggtcctacaggtatttacttctcattggtcagtctt
cagacaacttctggttaa
DBGET
integrated database retrieval system
