Arabidopsis lyrata (lyrate rockcress): 9311652
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Entry
9311652 CDS
T01578
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aly03036
]
9311652
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
9311652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_IFT122_1st
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Ctf4_C
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_SCAP
Tricorn_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
eIF2A
Motif
Other DBs
NCBI-GeneID:
9311652
NCBI-ProteinID:
XP_002875584
UniProt:
D7LPC7
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MKSRSLKLREAHKVGGSAAFCSILWDHKAEHFVTSSSTDPSISVHDGLTPSTLPPTILRH
HQDGVTALALSNDSTFLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLA
AAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGIV
SFTLKGVAPDTGFNTSIVNIPRWSPDGRILAVPGLRNDVVMYDRFTGEKLFALRGDHLEA
ICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRQKFEERICCMAWKPNCNALSVIDTK
GKYGIWESLVPSSMLSPTVGVPDILPKKRNEILNFDEEIEEEIYRASESLDDAMGDSDDG
ESHHASRKRLRKKTLIDDDVDAYEELNDGSSLPSASENRKKSHRAHREKQGARSGAFKST
SASTKYKMQSPFQPGATPLEPGKRTFLCYNILGCITTIEHEGNSRIETDFHDTGRGPRVS
SMIDIYGFTMASINESGCVFANPCKGEKNMSVLMYRPFRSWASNSEWTMRFEGEEVKVVA
NGSGWVAAVTSLNLLRIFSEGGLQKHILSLDGPVVTAVGCKDHLAVVTHVSECLPSNEQV
MEFRVFNISKMTQELKGRVALTPGSRLTWIGFSDEGSLSSYDSEGVLRVFTSQYGGSWIP
VFSTSKEKKQEENYWVVGLNTTSLYCIACKYPEIFPQVTPKPILTILDLSLPLASSDLGA
ASLENELMLKQLLLYETQRRVDDMALVGVDTTALEDEAFDLEVSQDKCILRLISSCCSSD
SFVRASELMKLLTLEKSMRAAITLVTKLKLPFLAEKFSSILEERLLEEANEAITDPSENP
NREVVTRVESKVQNPPASIQTSESTEAVMKSSATKLCATTLVRKAKVSEGLKLGKEQTKK
DETEDAKIKEIKKLNLKNPVNNVNKEDKGQKKEVNQGEARRSSNPFLKSTVK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacgatcgctaaagctccgggaagcccataaagttggcggaagcgccgccttc
tgctctatcctctgggaccacaaagccgaacatttcgtcacttcatcttctaccgatccc
tcaatctccgtccacgacggactcactccttccactttacctcctacgattcttcgacat
caccaagacggcgtcaccgccttggctcttagcaacgactctactttcctcgcttccgga
tctattgaccattgtgtgaagctctacaagttcccaagtggggaatttcagacgaatatt
actagatttacgcttccgattcgcgtgcttgcgtttaacggctcagggagtctattggca
gctgctggagatgatgaaggaatcaaacttatcaatacatttgatggttcgattgttaga
gttttgaaagggcacaaaggacctgtgaccggcttagatttccaccctaatggtgagctc
ttggcttcgattgacacaactggtactgtgttatgctgggaacttcaaaacggaattgtt
tcgtttacccttaagggtgttgcgcccgacacaggtttcaacacttccattgtgaatatt
cctagatggagccctgatggaagaatccttgccgtgcctggtttgagaaacgatgtggtg
atgtatgatagattcactggggagaagctttttgccttgagaggtgatcatctcgaagct
atatgctatttaacgtgggctcctaatggcaagtatatagctacatctggtcttgataaa
caagttcttctctgggatgttgataagaaacaagacatagacaggcagaaattcgaggag
aggatatgttgtatggcctggaaaccgaattgtaatgctttgtcggtcattgataccaag
ggaaaatacggaatttgggaatctttggttccatcatccatgctatctcctacagtgggt
gttccagatatactaccaaagaagaggaatgagattcttaattttgatgaagaaatcgag
gaagaaatttatcgtgcatctgaaagtttagatgatgctatgggagatagtgatgatgga
gaatctcatcatgctagcaggaaaagattgaggaagaaaactttgattgatgatgatgtt
gatgcatatgaggagcttaatgatgggagtagcttaccttcggcatctgaaaacaggaaa
aaatcacatagagcacatagagagaagcagggtgcaagaagtggggcttttaaaagcact
tcagcatcaaccaagtacaaaatgcaaagtccctttcaacctggtgcaacaccactggaa
ccaggaaaacggacgttcttgtgttacaatatattgggatgtataactacaattgaacat
gaggggaactcccgtattgagacagattttcatgatactggaagaggtccacgagtttca
tcaatgatcgacatctatggcttcactatggcatcaattaatgaaagtgggtgtgtcttt
gcaaatccttgcaagggagaaaagaacatgagtgttctgatgtatcgaccatttagaagc
tgggccagtaatagtgagtggacaatgaggtttgaaggtgaagaggtgaaggttgttgct
aacggttctggttgggttgctgcagttacaagcctcaatttgcttcgcatatttagcgag
ggtggtttacagaaacatattctttcccttgatgggcctgtagtcactgcagtaggatgc
aaggatcatcttgctgtggtaactcatgtttcagagtgtcttccttcaaatgaacaggtg
atggaattcagagtctttaacatatccaaaatgactcaggagttgaaaggccgtgttgcc
ttaacccctggctcacgtttaacatggataggattcagtgacgaaggttctttgagctca
tacgattctgagggtgtgttgagagtttttactagtcaatatggtggctcatggatccca
gtcttcagtaccagtaaagagaagaaacaagaagaaaactactgggtggttggcttgaat
acaaccagtttgtactgtatagcttgtaaataccctgagattttcccacaggtgacacct
aaaccaatccttaccatactagacctttctctcccgcttgcatcctcagatttaggagca
gcatctctagaaaatgagttaatgctaaagcagctgcttttatacgagactcaacgaaga
gtggacgatatggctttggtcggggtagacacaacagcacttgaagatgaagctttcgac
ctggaagtttctcaagataaatgcatactaagactcatcagctcgtgttgtagtagtgat
agttttgtaagggccagtgaacttatgaagcttttaactctagaaaaatcaatgagagca
gcaataacactggttaccaaactcaagcttccttttttggcagaaaaattcagcagcata
ctggaggaaaggttgcttgaagaagctaacgaggcaataacagatccttcagagaatcca
aacagagaagtggttacaagagttgaatccaaggtccagaatcctccagcttcgattcag
acaagtgaaagcacagaggcagttatgaaatcttctgcaactaagctgtgtgctactaca
cttgtaaggaaagcgaaagtttcagaaggtcttaagctgggaaaagaacaaacaaagaaa
gacgaaactgaagatgcgaagataaaagagataaagaaattgaatttgaagaatccggtg
aacaatgttaacaaggaagacaagggacagaaaaaggaagtgaatcaaggagaagctcga
cgttcttcaaacccgttcctgaaatcaactgttaaatga
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integrated database retrieval system
