Arabidopsis lyrata (lyrate rockcress): 9311928
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Entry
9311928 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9311928
Membrane trafficking [BR:
aly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
9311928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINT1_TIP1
Gp58
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
9311928
NCBI-ProteinID:
XP_020880904
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MEAIKPLPQVSSFSASVFSFLDDKFRDSTDLSQSPGLVSELQTEISELDQRLAGLNRQLE
SGLASYASFSDRVGGLFVEVNAKLANLSSSTSVPRSASDGGKEEEATEQLAGEELPSLAK
EVAQVESVRAYAETALKLDTLVGDIEDAVMSSLNINLRTSRSSGFEEVRLHAIKTLKTTE
EILSSVARRHPRWARIVSAVDHRVDRALAMMRPQAIADYRALLSSLGWPPQLSTLTSASL
DSKSENVQNPLFNMEGSLKSQYCGNFQALCSLQGLQLQRKSRQLGSHMGENVLFHQPLWA
IEELVNPLTVASQRHFTKWSEKPEFIFALVYKITRDYVDSMDELLQPLVDEAKLAGYSCR
XEWVSAMVSSLSLYLVKEIFPIYVGQLNEANETDLRSEAKVSWLHLIDLMISFDKRVQSL
VSQSGILSLQEDGNLLRISSLSVFCDRPDWLDLWAEIELDERLVKFKADIDNDRNWTAKV
QDELISTSNVYRPPIISSIFLQHLSSIIERSKSVPAIYLRARFLKLAASPTIHKFLDCLL
LRCQDAEGLTALTENNDLIKVSNSINAGHYIESVLEEWSEDVYFLEMGTGQHDPQEVPGL
ENFTEPSEGIFGEEFEKLEKFRLEWINKLSVVVLRGFDARTREYIKNRKQWQEKRDKEWT
VSRALVGALDYLQGKTSIIEENLNKADFTAMWRTLASEIDKLFFNSILMANVKFSNDGVE
RLKEDMEVLYGVFRTWCVRPEGFFPKLSEGLTLLKMEEKKVKDGLSRGDKWLRENSVRYL
SEAEAKKVAKSRVFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatcaaaccacttccacaggtctcgagcttctccgcttcagtatttagcttc
ctcgatgacaaattcagagactccacggatctctcccagtctccaggtctggtttctgag
ttacagaccgagatttccgaattggatcagagattagccggattaaatcgccagctcgag
tccggtcttgcttcttacgcttcgttttccgatcgcgtcggtggtttatttgtcgaggtt
aatgccaaattggctaatctctcttcttctacctccgttcctcgctccgcgtcagatggc
ggaaaggaggaggaggcgacggagcaattagccggggaggagcttccgtcattagcaaag
gaagtcgcacaagttgagtctgtgcgggcttatgctgagactgcactaaaacttgatact
ttagtgggtgatatcgaggatgctgtgatgtcttctttgaatataaacttgagaacatct
cgatcaagcggttttgaagaagtgcgtctacatgctatcaaaacacttaaaacgacagaa
gagatactgagttcagtagctaggagacatcctcggtgggcacgtattgtttctgcagtt
gatcacagagtagatagagccttagccatgatgagacctcaagcaattgcggattacaga
gcgttgctttcttctcttggatggccacctcagctttctacactaacttcagctagtctt
gattcaaagtcagaaaatgtccaaaatccgcttttcaacatggaagggagcctcaaaagt
caatactgtggaaattttcaggccttgtgcagcctgcaggggttgcagttgcaaagaaag
tcgcggcagcttgggagccatatgggagaaaatgttcttttccaccagccactctgggct
attgaagagctggtcaaccctctgacagttgcatctcagcgacattttacaaagtggagc
gaaaagcctgaattcatttttgcccttgtgtataaaatcacaagggactatgtcgattct
atggatgagttgttacaaccgctcgttgatgaagcaaaactagctgggtacagttgccga
taagagtgggtttcggctatggtaagctcattgtctttgtacttggtgaaagagatattc
cctatatatgttggacagctaaacgaagcaaatgaaactgatcttcgttctgaggccaag
gtttcgtggctccatctcattgacctgatgatctcttttgataagcgagtacagtctctg
gtatcacaatcaggaatactttcgcttcaagaagatgggaatcttctgagaatttcctct
ctctcagttttctgtgacagacctgattggctcgatttatgggcagagatagagctagat
gagaggctagtcaaattcaaggcagatattgataacgacagaaattggacagcaaaggtc
caagacgaactcatctccacttccaacgtttacagaccaccaatcatttccagcatcttt
ctgcagcatttgtcatcaataatcgaacgatccaaatcagtaccggccatatatttgagg
gcaaggttcctgaaattggcagcctcaccaacaatccataagttcttggattgcctcctt
ctcaggtgccaagacgccgaaggactaactgcattaaccgaaaataacgatctaatcaag
gtctcaaactctatcaatgctggtcactacattgaatctgtattagaagaatggtctgaa
gatgtatatttcctcgaaatgggaactggacagcacgatccacaggaagttccaggactg
gagaattttacagaaccttctgaaggtattttcggagaagaatttgagaagttggagaag
ttccggctagagtggataaacaagttgtctgtggtggtcttgagaggctttgatgctcga
actcgagaatacataaaaaacagaaagcaatggcaggagaagagagacaaagaatggaca
gtgtcaagggcactagttggggctctagactatttgcaaggaaaaacgtctataatagaa
gaaaatctaaacaaagcagactttacagctatgtggaggactctagcctctgagatagac
aagttgttcttcaacagcatcttgatggcgaacgtgaagttttccaatgatggagtcgaa
aggttaaaagaagacatggaggttctatatggggttttcaggacgtggtgcgttagaccc
gaaggtttctttcctaaactaagtgaggggcttacgcttctgaagatggaagagaagaaa
gtgaaggacggtctgagtagaggcgataagtggttacgtgagaacagcgttcgatatttg
agtgaagccgaagccaagaaggtagctaagagtagagtcttctcttag
DBGET
integrated database retrieval system
