Arabidopsis lyrata (lyrate rockcress): 9312083
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Entry
9312083 CDS
T01578
Name
(RefSeq) putative small RNA degrading nuclease 4
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9312083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9312083
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
RNases
9312083
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DUF4421
Motif
Other DBs
NCBI-GeneID:
9312083
NCBI-ProteinID:
XP_020881754
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MENYKTTLQAMQRQANRLMIEKFKQESHDKDTPEQRLIRLTVEHPQYRVDFSFHSHSKDW
FVSDVGTKMSNVMISNQMVALDCEMVLCEDGTEGVVRVGAVDRNLKVILDEFVKPHKPVV
DYRTTITGVTAEDVIKATLSLVDIQEKLRPFLSSGTILVGHSLNHDLEVLKIDHPIVIDT
SLVFKYPNSTKRRRPSLNTLCMSVLGYEVQKTGVSHHCVHDAVAAMKLALAVIEKRVDTT
ITLTKEMVEAEKSRLFLHRIPHYLSSEELKKDLSLKFFPNKFTVDVKPAKTQGGYYCAVV
VFGSSLEANQAFENVNGYQETDSSGLPQKLISCSRATFYVRKMA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagaactataaaacaactttgcaagctatgcaacgccaagccaatcgtctgatgatt
gaaaagttcaagcaagaatctcatgacaaagacactcctgagcagaggctaattcgattg
accgttgagcatccgcaataccgtgtcgacttttcgtttcactcacactccaaggattgg
tttgtatccgatgttggaacgaaaatgtcgaatgtgatgatttcaaaccaaatggtagct
cttgactgtgaaatggttctttgtgaagatggaaccgagggtgtggttagagttggcgct
gttgaccgcaatttaaaggtgatccttgatgaatttgtgaaaccgcacaaacctgttgtt
gactataggacaactattacaggagttactgctgaagatgtcatcaaagctactctctct
ttggttgatatacaggaaaaattgcggccgtttctctcttcgggtacaattttggtaggt
cacagtttgaaccatgacttggaagtgttgaagatagatcatcccatagtaattgatact
tcacttgtatttaagtatcctaattcaacaaagcgaagaagaccttctcttaataccctt
tgcatgtctgtgttggggtacgaagtccaaaagaccggtgtttctcatcactgcgtacac
gatgcagtcgctgcgatgaaacttgcacttgctgttatagagaaaagagttgacacaaca
atcacactaactaaagagatggtggaggccgagaaatcaagactctttctacatagaatc
cctcactatctgtcatctgaagagctgaaaaaagatctttctctaaagttttttcccaat
aagtttacagttgatgttaagccagcaaaaacacaaggaggttactattgtgcagttgtt
gtcttcggtagctcattagaagcaaatcaagcatttgagaacgttaatggataccaagaa
acggattcatcggggctgccacagaaactcatttcttgttcaagagccactttttatgtc
cgtaaaatggcttaa
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