Arabidopsis lyrata (lyrate rockcress): 9312134
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Entry
9312134 CDS
T01578
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9312134
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
9312134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
9312134
NCBI-ProteinID:
XP_002876066
UniProt:
D7LTM5
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPVSEAWLWYRNPNANANANANAPSSSNA
ALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAGAGRA
AAMMMIRSGGAGGGGGGSGGVSCQDCGNQAKKDCAHMRCRTCCKSRGFECPTHVRSTWVP
AAKRRERQQQLATVQPQTHLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAE
VSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAPGES
SSGGGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFMAG
TQFFPNPRS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtttttctcgctagacggtggtggaggaggaggcggaggtggaggaaacaac
caagaagatcaccggagcaacacaaaccctcctccgcctgtatcagaagcttggctctgg
tatagaaaccctaacgcaaacgcaaacgcaaacgcaaacgctccttcttcttcaaacgct
gctttaggaacacttgagttatggcaaaaccacaatcagcaagaaatcatgtttcagcat
cagcaacatcaacaaaggttggatctttactcttccgccgcaggtttaggtgttggacca
agtaatcataaccaattcgatatctccggcgaaacttcaaccgccggcgccggaagagct
gcggcgatgatgatgattcgtagtggtggcgccggaggaggaggaggaggaagtggtggt
gtgagctgtcaagactgtgggaatcaagcgaagaaagattgtgctcacatgaggtgtaga
acttgttgtaagagccgtggcttcgagtgtcctactcacgtgagaagcacgtgggttcct
gctgctaaacgccgtgagagacaacagcaactagctacggttcagccgcaaacgcatctg
ccacgcggtgagagcgttcctaaacgccaccgtgagaatttaccggcaacttcttcatct
cttgtctgcactcgcataccttctcattcagggctagaagttgggaatttcccggcggag
gtgagttcatcggcggtgtttaggtgcgtgcgtgtgagctcagtagaagatggagaagaa
gaatttgcttaccaaacagccgtaagcatcgggggtcacattttcaaaggcattctatac
gacctcggtcctggaagtagtggtggcggaggctacaacgttgttgcccccggtgagagc
tcctctggtggtggtggagctcaacagctgaatcttataacagctggctctgtaacggtt
gctaccgcttcttcctctactccaaatctcggtggtattggcagctcatctgccgcggca
gccacgtacattgatccagccgctctttatccaactccgatcaatacattcatggccggt
acacaattctttcccaacccaagatcgtga
DBGET
integrated database retrieval system