Arabidopsis lyrata (lyrate rockcress): 9312256
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Entry
9312256 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL7
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9312256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9312256
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
9312256
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
HECT type E3
9312256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
9312256
NCBI-ProteinID:
XP_020881158
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDLNRKHKVSLRGASSGEISRDALLAKVSQERELRSYARRANAAALFIQRVWRSYIVRKK
AAIEIREQWENLLSCHSDSLTKSWVSSRVLRPFLFFIRSLSVQHQKIQSRDIHCMQTCFK
ILLESINSNDQGYNFCSLAVGTFEESKTWACQTRRMISLCSFLLMECNYSQERIKDVIGV
CALLLRILIVLTDPKSWKIITKENFEDAETAGKMIIQFIGSCKSGYYSAVRRYIKTLTKH
RDERLLITTSAVTLALRPFHVKQPAFVDDYQPDSNLAIEEYVSLILTIPRLVFCLPSALI
RALKHKSILMPSFRTILLLKDKILTRISEMEHSEKQSCTMEIPSVGWVIGNIISLATVSE
TDFMDPQESNPEMFYVLYVHVIVTLAENLLSKVENVGIQDIHLDIEATSNEAGKGNSDKI
SFVEMLRPVCQQWHLAKLLAASGKEICVIADKDASTTNSKKGSETLGLLDIARLYSCMLR
IFCVLNPVLGPLPVLNMLSFCPGYIVSLWNSLESVLIPENGRTADDASHGSAKTSWNTRS
PSEKKLKHLKNDSVNKWVNVLNKFSGKSPGPREHMECISDQPGSSQVNESTNDVWDVETL
RGGPVGISKEVSSLLHLFCATYAHLLVVLDDIQFYEKQVPFMLEKQRRIASMLNTLVYNG
LLRGIGPESRQLMDSAIRCLHLLYERDCRHPFCPSALWLSPGRTSRPPIAFAARTHEVLP
ASDVLTSPSMGSVITITPHVFPFEERVHVFREFISRDKASRKMAGEVDAPGARSIEIVVR
RGHVVEDGFQQLNSIGSRLKSSIHVSFVNESGLPEAGLDYGGLSKEFXTDITKAAFATEY
GLFSQTPTSDRLLVPSPSARHLENGIQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLG
RYSFIDELSGLDPELYRNLMYVKHYDGDLKELCLDFTVTEEFCGKMSITELKPGGKDISV
TNENKMQYIHAMADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDI
DVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQP
TFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNTLKLPTYKRASTMREKLLYAITSNAGF
ELS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaatcgcaaacacaaggtgtcccttagaggtgccagcagcggggagatatca
agggatgctttgcttgctaaagtctcacaagaaagggagctacgcagttatgcaagacgc
gctaatgctgctgctctttttattcagagagtttggaggtcttatattgtgagaaagaag
gcagctatagagatccgagagcagtgggagaatttactaagttgccattctgattcactg
accaaaagttgggtatcaagcagagtattgagaccgtttctcttctttatcagatcttta
tctgtccaacatcaaaagatacagtctagagatatacactgcatgcaaacttgctttaag
attcttttggaaagcatcaactctaatgatcaggggtacaatttttgctctctagcagtt
ggtacatttgaagaaagtaaaacatgggcctgtcaaacacgaaggatgatttctctctgc
tctttccttctcatggagtgtaattattcacaggaaaggataaaagatgttattggtgtc
tgtgcccttctattacgtattcttattgttttaactgatcccaaaagctggaagatcatt
acaaaggaaaactttgaagatgcagaaacagctggaaagatgatcattcagtttataggg
agctgtaaaagtggatattactcagcagttaggagatatatcaagacattaaccaaacat
agagatgagagactgctgattactacaagtgcagtaactttggctctacgaccattccac
gtgaaacagcctgcttttgttgatgactaccaaccggactcgaatttggctattgaagaa
tatgtttctctaatactgacgattcctcggctcgttttctgcctgccaagcgctctcata
cgtgcactgaagcacaagagcatactaatgccaagctttcgcaccatattgcttttgaag
gacaaaattttgaccagaatatcggaaatggagcattcagagaagcaaagttgtaccatg
gagataccttctgttggatgggttatcgggaacatcatttccctggcaacagttagtgaa
accgattttatggatccacaagaatcaaatccagagatgttttatgtcttgtatgttcat
gttattgtgactctcgccgagaatctattgtctaaggttgaaaatgttggaattcaggat
attcatcttgatattgaggccacatcaaatgaggctgggaaaggaaattcagataagatt
tcttttgtggaaatgcttcgaccagtatgtcaacagtggcatctcgcaaaactgttggca
gcttctgggaaagaaatttgtgttatagcagataaagatgcatcaacaacgaatagtaag
aaaggatcagaaacactaggattgcttgatatagcacgattatattcatgcatgttgaga
atcttctgcgtgctgaatcctgtccttggacctttgcctgtccttaacatgttatccttc
tgtcccggatacattgtctctttgtggaattctctagagagtgtcctaatccctgaaaat
ggtcgcactgctgacgatgcatctcatggatctgctaaaacttcatggaatacaagaagt
ccttctgagaagaaattgaaacatcttaagaatgacagtgtcaacaagtgggtgaatgtg
ctaaacaagttttctggtaaatcaccgggaccgcgtgaacatatggagtgtattagtgat
caaccaggatcaagccaggttaatgagtcaactaatgatgtatgggatgtggaaactctg
agaggtggtcctgtaggtatctccaaagaagtgtcatccctgcttcatctattctgtgca
acctatgcgcatttactcgttgttcttgatgacatacagttttatgaaaagcaggtcccc
tttatgctagagaaacaacggagaattgcatcaatgcttaatacactcgtttacaatgga
ttgttgcgaggcataggtcctgagagtagacaactgatggattctgctatcagatgtttg
catttattgtatgaaagagattgcaggcaccctttttgtccttctgccctgtggctctca
cctggtagaactagtagacctccaattgcatttgctgccagaactcatgaggttttacca
gccagtgatgttcttacgtctccaagcatgggttctgttataacaattactccgcatgtc
tttccatttgaggaaagggtccatgtgtttagagagtttataagcagggataaagcttca
aggaaaatggctggtgaagtggatgcacctggtgcgaggtcaatagagatagtcgttcgt
cgaggtcatgtggttgaagatggttttcaacaactgaattcaattggtagcaggctaaaa
tcatccatccatgtctcgtttgtgaatgagtctggccttcctgaggctggcctagactat
ggtggcctttcaaaagagtttntgactgatataacaaaagcagcttttgctactgagtat
gggttattctcgcaaacccctacttcagataggttgcttgttcctagcccatctgcacgg
caccttgagaacggaattcagatgattgagtttcttggaagaattgttggaaaagctcta
tacgagggaatactgctggattactctttttcacacgttttcatccagaagcttttggga
cgttatagctttattgatgaactatcagggcttgatccagagctctacaggaacctcatg
tatgtcaagcattatgatggtgatttgaaggaactctgtctggatttcacagtcactgaa
gagttttgtgggaaaatgagcataactgagcttaaacccggtgggaaggatatttcagtt
acgaatgagaacaaaatgcaatatattcatgcaatggctgactataaactcaaccggcag
attgtgcccttttcaaatgcattttacagaggattgactgaccttatatctcctgcttgg
ttgaaactatttaatgcccatgaatttaatcagttactctctggaggaaaccatgatatc
gatgtggatgacttacggaggaatacaaaatacacaggtggttacagtgatagcagtcga
acaatcaaaatcttctgggaggtcatgaaagggtttgaaccgagtgaacgttgcttgctc
ctcaaatttgtgactagttgttctcgggcaccactccttggtttcaaatacttgcagcca
accttcatcatccataaagtctcttgtgatacctctctttgggctgctattggaggacaa
gatgtagaaaggcttccatctgcatctacgtgctacaatactcttaagcttccaacgtat
aaacgagcaagcactatgagggaaaaactattgtatgcgattacttcaaatgcaggattt
gaactctcgtag
DBGET
integrated database retrieval system
