Arabidopsis lyrata (lyrate rockcress): 9312293
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Entry
9312293 CDS
T01578
Name
(RefSeq) RHOMBOID-like protein 4
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9312293
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
9312293
Peptidases and inhibitors [BR:
aly01002
]
Serine peptidases
Family S54: Rhomboid family
9312293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
9312293
NCBI-ProteinID:
XP_002877941
UniProt:
D7LUM3
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MGEKDSETAPIWEKTRQRESSNNNNIHPMDLESSSLSGQQRSLNRSRSSYEERGRGVKEF
RSWFSWLIPCFVVANVVVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGPSSLT
LQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLVNMLTLLFIGIRMEREFGFIRIGLL
YLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKIVTIITLVIIV
AVNLGLGVLPGVDNFAHIGGFSTGFLLGFVLLIRPHYGWINQRNAPGAKPHRFKMYQGIL
WTISLLLLVAGFITGLISLFNNVDGNKHCSWCHYLSCIPTSKWSCNREPASCTTTQLGNQ
LSMTCLRNGKSASYILANPSDSRINSLCVQLCR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaaagattcagaaacagctccgatttgggaaaaaactcgacagagagagagc
agcaacaacaacaacatacacccaatggatttagaatcgtcttctctatctgggcaacag
cgatcattgaatcggagtcgaagttcttatgaagaacgaggaagaggagttaaagagttt
cggagttggttctcttggctcattccatgtttcgttgttgctaacgttgtcgtgtttgtg
atcaccatgtatgtcaacaattgtccgaagaaatctggagattgttttgctgatttcttg
ggtcgattctcgtttcagaacaccagagagaatcctcttttgggtccttcctctctcacg
ttacaaacaatgggtggattggatgtaaaaaaagtggttaaaggagatgagggatggcgt
ctactttcttgcaactggttacatggaggagttgttcatttattggtgaacatgttgact
cttttgttcatcggtatacgtatggaacgtgaatttggttttattcggattggattgcta
tatttgatatcgggctttggaggaagtatattgtcagctctgttcctccgctcaaacatc
tccgttggagcatctggtgcggtgtttggtttacttggtggaatgctttctgagatcttt
atcaactggacgatctattctaacaagattgtgacgattataactcttgtaataattgtg
gcggtgaacttgggacttggtgtgctcccgggagtagataactttgctcatattggaggg
ttttctacgggttttcttcttggatttgtgctcttaattcgtccccattacggatggatc
aaccaaagaaacgctcctggagctaaaccccacaggttcaagatgtatcagggcatatta
tggaccatctctcttctcctcttggtcgccgggttcattactggattgatctctctcttc
aacaacgtcgatggaaacaaacattgctcatggtgtcattatctttcatgtattccaact
tctaaatggagctgtaaccgagaaccagcgtcttgcacaacgactcaattaggtaaccaa
ttgagcatgacttgtttgaggaatgggaaatcagcatcttacattttggcaaatccctcg
gattcacggattaatagcttatgtgttcagctttgccgttga
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