Arabidopsis lyrata (lyrate rockcress): 9312316
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Entry
9312316 CDS
T01578
Name
(RefSeq) SUPPRESSOR OF ABI3-5
KO
K13094
RNA-binding protein 5/10
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9312316
Spliceosome [BR:
aly03041
]
Complex A
Other components
Complex A specific factors
9312316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
zf-RanBP
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
9312316
NCBI-ProteinID:
XP_020880887
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MDPSRYGRQQEWDNNSAPEGFGTQHDPNHRFGASYDERYPDERLMRDDVYNYPPGHDTLG
ALPQSRRRNYEENYHREHRRQEKPYIDSNYAADYYHDSEAGSRNGYYHDHEHERSSRYDG
RNDYSCNDNNYRSRNYQHSRDDGREKDYDYSRRSYDSDYERGSVRDGSRKSRDPQDRDRI
SRDREWDSRDRDWDKKCFSRERDESPHKRYEKSRSRSTGRGEFSRSRSPRGRSHGRSYRE
DSYEGDHWNESERQREYEDRHDQDHFSATPSATVVVKGLSMKSTEEDLYQILAEWGPLHH
VRVIREQNSGISRGFAFIDFSTVDAARTMMDRLEHDGIVLNGRKLSFHYSQPTGRAGVSR
RQEHASRRSYGGSRNMIVPTDWICTICGCINFARRTSCFQCNEPKTKDSPSADVGLSNSA
PGKRISETGPTHVLVVRGLDEDADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHF
CSVEDATKALEATNGTALERNGKILRVAYAKSVHGSGTGISAPSHSNNLAAAAIEAATFS
QQYDGVGWAPKEYNPDEKQTTGGQAQGVGEIESQKGTSAPQSGYVWDEASGYYYDAASGY
YYDGNSGLYYDSNSGLWYSYDQQTQQYVPCPDQNNESKLTENQPDSAKKEKSSQQKVIIS
AATTPNVEKALSLPDAVQAAAAAAIASEKREKERVKEIKLASKTSLLASKKKMNNVLTMW
KQRSHETQIQRPSPSLVDNPPTVLAEARSSFSTGQSMGKLKSDVIIAKERSNSNHGVSAL
TTAESSSSSTTGGPLMGVMRGSFGGTVGGASSSASVQVPPVLPSASSVSAPVSVSGSGRR
RFSEKPTAVPTHREQTQTSYRDRAAERRNLYGSSTSSGNDVIDSSEDLMGLRKGSLDPTP
FPPGVGGRGIITTTEVSSFDVITEERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPV
QAQGVDRRAGLGSQQKKVDAEFEVQPGDTYRTLLHKKALARFRDMSDNN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagtcgatatggtcgtcagcaagaatgggataataacagtgctccggagggt
tttggtactcagcacgatccaaatcatcggtttggcgcatcatatgatgagagatatcct
gatgaaaggttgatgcgggatgatgtttacaattatccacctgggcatgatactctgggt
gctttgcctcaatctagaaggcgaaactatgaagaaaattatcatcgtgaacatcgcagg
caagaaaagccttacatcgattcaaattatgctgctgactattatcacgatagtgaagct
gggagtcgtaatggatattaccatgatcatgaacacgaaaggtcgtcccgatatgatggc
cgcaatgactattcttgtaacgataacaactatagatctagaaattaccaacatagcaga
gatgatggtcgtgaaaaagattatgactattctcgccggagttatgattctgattatgaa
agaggcagtgtgagagatggcagtcgaaagagccgtgatccgcaggatagagatcggatt
tcacgagatagagaatgggactcacgtgatagggattgggacaaaaaatgtttcagccgc
gaaagagatgagagtcctcataagagatatgagaaatcacgatctcgatctaccggacgt
ggtgagttctctagatcaagatctcctagaggtcggagccatgggcggagttaccgggag
gacagctatgagggggatcactggaatgaaagtgagaggcaaagagaatatgaagataga
catgaccaggatcatttttctgctaccccatccgccactgttgttgtgaagggtctctcg
atgaaatcaacagaagaagatctataccagattctggctgaatggggtcctttgcatcat
gtccgtgtgattcgggagcaaaattctgggatttctcgtggatttgcttttattgatttc
tccactgtggatgccgcacgcaccatgatggatagacttgagcatgatggtatagttttg
aatggaaggaagctaagtttccattacagccaacctactggtagggctggtgtgtcccgt
aggcaggaacatgcttctagacgcagttatggtggaagtcgaaacatgatagttcccaca
gattggatctgtacaatctgtggctgtatcaattttgcgcggcgaacctcctgctttcag
tgtaatgaaccaaagaccaaggattctccttcagctgatgtaggtttatcaaactcagca
ccaggaaaacgaatttctgaaacaggtccaactcatgtcctggttgtacgtgggttggat
gaagatgctgatgaggaaatgcttcggtatgaattttccaaacatgctcctatcaaggat
cttcgccttgtgagagacaaattcactcatgtttcacgaggatttgctttcgtgcatttc
tgttcggttgaggatgctactaaggcacttgaagcaacaaacggaacagctcttgaaagg
aatggtaaaattcttagagttgcatatgcaaagagtgttcatggttctggaactggtata
tcagcaccctctcactccaacaacctcgctgctgctgcaattgaagcagcaacattttcg
caacagtatgacggtgttggatgggctccaaaggaatacaatcctgatgagaaacaaacc
actggagggcaggcccagggtgttggggaaattgaatcccagaaagggacatctgctcct
cagtctggctatgtgtgggatgaagcatctggttattactatgatgcggcttctggatac
tactacgatggaaattcaggtctttattatgacagcaatagtgggctttggtactcgtat
gaccagcaaacgcaacaatacgttccttgtcctgatcagaacaatgagagtaaattaact
gaaaaccaaccagactctgccaagaaggagaaatccagtcaacaaaaagttattatctcg
gcggctactacccctaatgtagaaaaagctctgtccttaccagatgcggttcaggcggca
gcagcagcagcaattgcatcagagaagagagagaaagagagagtgaaggagataaaactt
gcgtcaaagactagcctactggctagcaagaaaaaaatgaataacgttttaacaatgtgg
aagcagcggagtcatgaaacccaaatacaacgtccctcaccctcacttgttgacaatcca
cctacagttctggctgaagcgaggtcgtctttctccactggacaatccatgggaaaactg
aaatctgatgtaattattgcgaaggagaggagtaattccaatcatggagtttctgctctg
acaactgcagaaagctcgagcagcagtacaacaggaggacctttgatgggggtgatgaga
ggttcttttggaggaactgtgggaggagcttcttcctcagctagcgtacaagtgccgcca
gttttaccttctgcttcttcagtttcggctccggtttcagtttccgggagtgggagaaga
aggttctctgaaaaaccgactgcagttcctactcacagagaacagactcagacatcatac
agggaccgtgctgcagaaagaagaaacttatacggctcatcaacttcaagtggaaatgat
gttattgattcaagtgaggatttaatggggttgagaaaaggttcattggatccaacacct
tttcctcctggtgtgggtggacgtgggattattacaaccaccgaagtcagtagtttcgat
gtgattacagaagagagagctatagacgagagtaacgtgggaaacagaatgctgaggaac
atggggtggcacgaaggatcgggtttggggaaagacgggagtggaatgaaagaaccggtg
caagcgcaaggcgttgataggagagcaggacttgggagtcagcagaagaaagttgatgct
gagtttgaggttcagcctggtgacacttacagaactcttctccacaagaaagcacttgct
aggtttcgggacatgtctgacaataattga
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