KEGG   Arabidopsis lyrata (lyrate rockcress): 9312374
Entry
9312374           CDS       T01578                                 
Name
(RefSeq) AP3-complex subunit beta-A
  KO
K12397  AP-3 complex subunit beta
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142  Lysosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    9312374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9312374
Membrane trafficking [BR:aly04131]
 Endosome - Lysosome transport
  Others
   AP-3 complex
    9312374
 Endosome - Golgi transport
    9312374
SSDB
Motif
Pfam: Adaptin_N Cnd1 AP3B1_C_2 HEAT_2 AP3B1_C INTS1_R4 DUF7610 Svf1_C
Other DBs
NCBI-GeneID: 9312374
NCBI-ProteinID: XP_002878034
UniProt: D7LV47
LinkDB
Position
Unknown
AA seq 1116 aa
MFNKFGSTSETLSKASAVVHRIGTDAHLYDDPEDVNIAPLLDSKFESEKCEALKRLLALI
AQGSDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPIALAAVGKCARDPAVYVRKYAANALPKLHDLRLEEHASAIE
ELVGILLNDHSPGVVGAAAAAFTSICPNNFKLIGKNYKKLCQILPDVEEWGQILLIGTLL
RYVVARHGLVRESLMLSLHGMDSNGLCEKDGLGRDLTLDKEEDGGKSDSFDVNLVSLVSK
CYIEGPDEYLSRSSYTDTVSSAFDSKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAA
GVQWIMAPLEEVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFETFFICSS
DAYQVKAYKLEMLSLVATTSSISSILREFEDYVKDPDRRFAADTVAAIGLCAKRLPTIPT
TCLDGLLALVRQESFAGDFESVDGEAGVLVQAVMSIQTIIERDPLRHEKVLIQLFRSLDS
IKVAAARAIIIWMVGVYCSLGHIIPKMLTTITKYLAWSFKSEASETKLQILNTTAKVLKS
AEADDFQMLKRVVIYVFELGECDLSYDVRDRTRFLKKLLSSKLACHKPAEDSVASQEHIA
THVVEHVFGRKLTPFSPLALHNRFYLPGSLSQIVLHAAPGYEPLPKPCSFVFEEQDQLSD
LDRQREAAADLDDSRESSETVDDDGSSDYDSESSIGSDCSSDGDERTVSNGVNDPAAPLI
QISETSVSADQEELRSKKALDLWLDDQPSTSNQTPSALNSNQSSYAKISIGDIGSRVKPK
SYSLLDPGNGSGLKVGYTFLSEVSTVSPLHVCVEVLFENSSAEPILEVNLEDEESMKVAD
SSEQTLVGKANASYNNVPTLIPMEEISCLEPRQSAKRLIQVRFHHHLLPMRLTLHYNGKE
VPVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFDDHVKDSRMENGKDKFLS
ICECITLKVLSNSNLHLVSVDLPVANSLEDATGLRLRFSSKILSSEIPLLITITVEGKCT
EVLNITVKINCEETVFGLNLLNRIANFMVEPSSSAS
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgttcaataagtttggttcgacgtcggagactctaagcaaagcttcagctgtggtgcac
cggatcggcactgacgctcatctttatgatgatccggaagacgtcaacattgctccactt
ctcgatagcaagttcgaatctgagaaatgtgaagctcttaagcgtctccttgctcttatc
gctcagggctctgatgtctccaatttcttccctcaggtggtgaagaatgtggcgtcgcag
tcatcggaagtgaagaagcttgtttacttgtatttgctacaatatgcagaaaagcgtcca
aatgaagcgttgctgtcgatcaactattttcagaaggacttgggggatccaaatccattg
gttagggcttgggcacttcgtacaatggcggggattcgcttacatgttattgcacctatt
gcactcgcagctgtgggtaaatgtgctagggatccagcggtttatgtccggaaatatgct
gcaaatgctcttccgaagttgcatgatttgcggctggaagaacatgcttctgcgattgaa
gagctagttgggatactgttgaatgaccattctccaggagtagttggagctgcggcagcg
gcattcacctccatctgtccaaataacttcaaactgattggaaagaactataagaagttg
tgccagattcttcctgacgtagaagagtggggtcagatattactcataggaactcttttg
cgctatgtggttgctaggcatggacttgtacgggaatctttgatgttgtccctacatggt
atggatagtaatggcttatgtgagaaggatggcctaggcagagatcttacattggataaa
gaagaagatggtggtaaaagtgattcatttgatgttaatctggtcagccttgtatctaaa
tgttacattgaaggtccagatgagtatctatcaagatctagttacaccgatacagtgtca
tctgctttcgatagcaaagagaccacatctattgcacataatgaagatgttaagatcctg
cttcagtgtacatccccattgctatggagtaataacagtgcggttgtactagcagcagct
ggcgttcaatggattatggcgcctctggaagaggttaagaaaattgttaaaccgctcttg
tttttgcttaggtcatccagcgcctccaaatatgtggtcctctgcaacatcctagttttt
gccaaagcagtcccttctctctttgctccacacttcgaaactttctttatttgttcctca
gatgcatatcaagttaaagcatacaagctggaaatgctttctctcgttgctaccacttca
tctatctcttcaattttgagagagtttgaggattatgttaaagatccagacaggagattt
gcggctgatacagttgcagcaattggtttgtgtgcaaaaagactgccaacaattccaact
acatgtcttgatggattattagcactagttcgacaggaatcttttgctggcgattttgag
tcagtggatggagaagctggagtgttggtgcaagccgtgatgtcgattcagactatcata
gagcgagatccccttcgtcatgagaaagttttaattcagctgtttcgtagtctggattca
atcaaggtagctgctgctcgtgcaattattatttggatggtgggggtctactgctctttg
ggtcatatcattcctaagatgcttaccacaataaccaagtaccttgcatggagctttaaa
tcagaggcatcagagacaaaacttcagattctcaatactactgctaaggttctaaaaagt
gcagaggctgacgactttcagatgttgaaaagggttgtgatttatgtgtttgaattgggt
gaatgtgacttaagctatgatgttcgtgatcgaactcgtttcctcaagaaactgctgtca
tccaaattagcttgtcataagccagcagaagacagtgttgcatcacaagaacatattgct
acgcatgttgtggaacatgtctttggaagaaaactgacacctttttcacctttagccctg
cacaatcgtttttatcttcctggatctctatcacagatagttcttcatgcagcccctgga
tacgaacctcttccaaagccctgcagttttgtttttgaagaacaagaccagctgtcagat
ttagacagacaaagagaggccgcagctgatttagatgattctcgggaatcatctgaaaca
gtggatgacgatggctcctctgattatgactctgaatcttctattggttcagattgcagc
agtgacggtgatgaaagaacagtgtctaatggtgtcaatgatccagctgctcctttaatt
caaatttcagagacttctgtttccgctgaccaagaagaactaaggtccaaaaaggccctg
gatttgtggttagatgatcagcctagtacatcaaaccaaactccatctgcattaaatagt
aatcagagctcttatgcgaagatatccattggtgatataggaagccgagtgaagcctaaa
agctatagtctcttagaccctggaaatggcagtggcttgaaggtaggctataccttttta
tctgaagtctctactgtatctccattacatgtttgcgtagaagttctgtttgagaacagt
tctgctgaacctatcctggaggtgaatttggaagatgaagaatcgatgaaggtagcagac
tcttctgaacagactttggttggtaaagcaaatgcatcttacaacaatgtgccaactcta
attccaatggaggaaatcagctgccttgaaccacgtcagagcgcaaagaggcttatccag
gttcggtttcatcaccacctgcttcccatgaggttaaccttacattacaatggaaaggag
gttcctgtcaagttacgacctgatcttggataccttgtgaaaccattttcaatgagtatc
gaggaattcttagccacagaatctcgattacctggaatgtttgagtatagtcgaaggtgt
acttttgacgatcatgttaaagattcaagaatggagaatgggaaagacaaatttctcagc
atctgcgagtgtataacactaaaggtgcttagcaactcaaatctacaccttgtatccgtg
gatttaccagttgcaaactcactcgaagatgcaactggtctgcgattaagattcagcagc
aaaatcttgagcagtgagatccctcttttgattactatcacagtcgaaggcaaatgcacc
gaagttctgaatataacagtcaagatcaattgcgaagaaacggtgtttggtttaaacctg
ttgaacaggatagctaatttcatggttgagccgtcttcgtcagccagttga

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