Arabidopsis lyrata (lyrate rockcress): 9312374
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Entry
9312374 CDS
T01578
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
9312374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9312374
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Others
AP-3 complex
9312374
Endosome - Golgi transport
9312374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C_2
HEAT_2
AP3B1_C
INTS1_R4
DUF7610
Svf1_C
Motif
Other DBs
NCBI-GeneID:
9312374
NCBI-ProteinID:
XP_002878034
UniProt:
D7LV47
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MFNKFGSTSETLSKASAVVHRIGTDAHLYDDPEDVNIAPLLDSKFESEKCEALKRLLALI
AQGSDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPIALAAVGKCARDPAVYVRKYAANALPKLHDLRLEEHASAIE
ELVGILLNDHSPGVVGAAAAAFTSICPNNFKLIGKNYKKLCQILPDVEEWGQILLIGTLL
RYVVARHGLVRESLMLSLHGMDSNGLCEKDGLGRDLTLDKEEDGGKSDSFDVNLVSLVSK
CYIEGPDEYLSRSSYTDTVSSAFDSKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAA
GVQWIMAPLEEVKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFETFFICSS
DAYQVKAYKLEMLSLVATTSSISSILREFEDYVKDPDRRFAADTVAAIGLCAKRLPTIPT
TCLDGLLALVRQESFAGDFESVDGEAGVLVQAVMSIQTIIERDPLRHEKVLIQLFRSLDS
IKVAAARAIIIWMVGVYCSLGHIIPKMLTTITKYLAWSFKSEASETKLQILNTTAKVLKS
AEADDFQMLKRVVIYVFELGECDLSYDVRDRTRFLKKLLSSKLACHKPAEDSVASQEHIA
THVVEHVFGRKLTPFSPLALHNRFYLPGSLSQIVLHAAPGYEPLPKPCSFVFEEQDQLSD
LDRQREAAADLDDSRESSETVDDDGSSDYDSESSIGSDCSSDGDERTVSNGVNDPAAPLI
QISETSVSADQEELRSKKALDLWLDDQPSTSNQTPSALNSNQSSYAKISIGDIGSRVKPK
SYSLLDPGNGSGLKVGYTFLSEVSTVSPLHVCVEVLFENSSAEPILEVNLEDEESMKVAD
SSEQTLVGKANASYNNVPTLIPMEEISCLEPRQSAKRLIQVRFHHHLLPMRLTLHYNGKE
VPVKLRPDLGYLVKPFSMSIEEFLATESRLPGMFEYSRRCTFDDHVKDSRMENGKDKFLS
ICECITLKVLSNSNLHLVSVDLPVANSLEDATGLRLRFSSKILSSEIPLLITITVEGKCT
EVLNITVKINCEETVFGLNLLNRIANFMVEPSSSAS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagtttggttcgacgtcggagactctaagcaaagcttcagctgtggtgcac
cggatcggcactgacgctcatctttatgatgatccggaagacgtcaacattgctccactt
ctcgatagcaagttcgaatctgagaaatgtgaagctcttaagcgtctccttgctcttatc
gctcagggctctgatgtctccaatttcttccctcaggtggtgaagaatgtggcgtcgcag
tcatcggaagtgaagaagcttgtttacttgtatttgctacaatatgcagaaaagcgtcca
aatgaagcgttgctgtcgatcaactattttcagaaggacttgggggatccaaatccattg
gttagggcttgggcacttcgtacaatggcggggattcgcttacatgttattgcacctatt
gcactcgcagctgtgggtaaatgtgctagggatccagcggtttatgtccggaaatatgct
gcaaatgctcttccgaagttgcatgatttgcggctggaagaacatgcttctgcgattgaa
gagctagttgggatactgttgaatgaccattctccaggagtagttggagctgcggcagcg
gcattcacctccatctgtccaaataacttcaaactgattggaaagaactataagaagttg
tgccagattcttcctgacgtagaagagtggggtcagatattactcataggaactcttttg
cgctatgtggttgctaggcatggacttgtacgggaatctttgatgttgtccctacatggt
atggatagtaatggcttatgtgagaaggatggcctaggcagagatcttacattggataaa
gaagaagatggtggtaaaagtgattcatttgatgttaatctggtcagccttgtatctaaa
tgttacattgaaggtccagatgagtatctatcaagatctagttacaccgatacagtgtca
tctgctttcgatagcaaagagaccacatctattgcacataatgaagatgttaagatcctg
cttcagtgtacatccccattgctatggagtaataacagtgcggttgtactagcagcagct
ggcgttcaatggattatggcgcctctggaagaggttaagaaaattgttaaaccgctcttg
tttttgcttaggtcatccagcgcctccaaatatgtggtcctctgcaacatcctagttttt
gccaaagcagtcccttctctctttgctccacacttcgaaactttctttatttgttcctca
gatgcatatcaagttaaagcatacaagctggaaatgctttctctcgttgctaccacttca
tctatctcttcaattttgagagagtttgaggattatgttaaagatccagacaggagattt
gcggctgatacagttgcagcaattggtttgtgtgcaaaaagactgccaacaattccaact
acatgtcttgatggattattagcactagttcgacaggaatcttttgctggcgattttgag
tcagtggatggagaagctggagtgttggtgcaagccgtgatgtcgattcagactatcata
gagcgagatccccttcgtcatgagaaagttttaattcagctgtttcgtagtctggattca
atcaaggtagctgctgctcgtgcaattattatttggatggtgggggtctactgctctttg
ggtcatatcattcctaagatgcttaccacaataaccaagtaccttgcatggagctttaaa
tcagaggcatcagagacaaaacttcagattctcaatactactgctaaggttctaaaaagt
gcagaggctgacgactttcagatgttgaaaagggttgtgatttatgtgtttgaattgggt
gaatgtgacttaagctatgatgttcgtgatcgaactcgtttcctcaagaaactgctgtca
tccaaattagcttgtcataagccagcagaagacagtgttgcatcacaagaacatattgct
acgcatgttgtggaacatgtctttggaagaaaactgacacctttttcacctttagccctg
cacaatcgtttttatcttcctggatctctatcacagatagttcttcatgcagcccctgga
tacgaacctcttccaaagccctgcagttttgtttttgaagaacaagaccagctgtcagat
ttagacagacaaagagaggccgcagctgatttagatgattctcgggaatcatctgaaaca
gtggatgacgatggctcctctgattatgactctgaatcttctattggttcagattgcagc
agtgacggtgatgaaagaacagtgtctaatggtgtcaatgatccagctgctcctttaatt
caaatttcagagacttctgtttccgctgaccaagaagaactaaggtccaaaaaggccctg
gatttgtggttagatgatcagcctagtacatcaaaccaaactccatctgcattaaatagt
aatcagagctcttatgcgaagatatccattggtgatataggaagccgagtgaagcctaaa
agctatagtctcttagaccctggaaatggcagtggcttgaaggtaggctataccttttta
tctgaagtctctactgtatctccattacatgtttgcgtagaagttctgtttgagaacagt
tctgctgaacctatcctggaggtgaatttggaagatgaagaatcgatgaaggtagcagac
tcttctgaacagactttggttggtaaagcaaatgcatcttacaacaatgtgccaactcta
attccaatggaggaaatcagctgccttgaaccacgtcagagcgcaaagaggcttatccag
gttcggtttcatcaccacctgcttcccatgaggttaaccttacattacaatggaaaggag
gttcctgtcaagttacgacctgatcttggataccttgtgaaaccattttcaatgagtatc
gaggaattcttagccacagaatctcgattacctggaatgtttgagtatagtcgaaggtgt
acttttgacgatcatgttaaagattcaagaatggagaatgggaaagacaaatttctcagc
atctgcgagtgtataacactaaaggtgcttagcaactcaaatctacaccttgtatccgtg
gatttaccagttgcaaactcactcgaagatgcaactggtctgcgattaagattcagcagc
aaaatcttgagcagtgagatccctcttttgattactatcacagtcgaaggcaaatgcacc
gaagttctgaatataacagtcaagatcaattgcgaagaaacggtgtttggtttaaacctg
ttgaacaggatagctaatttcatggttgagccgtcttcgtcagccagttga
DBGET
integrated database retrieval system