Arabidopsis lyrata (lyrate rockcress): 9312435
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Entry
9312435 CDS
T01578
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9312435
Membrane trafficking [BR:
aly04131
]
Autophagy
Other autophagy associated proteins
Others
9312435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_IFT140_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_Vps41
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EML
RMC1_N
Motif
Other DBs
NCBI-GeneID:
9312435
NCBI-ProteinID:
XP_002876367
UniProt:
D7LVG0
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MDPRRNFQPGGYDSRNTFTSGSFGPPDFGESDEAELVSVSWNQDYSCFAAGTSHGFRIYN
CEPFKETFRRELKGGGFKIVEMLFRSNILALVGGGPNSQYPSNKVLIWDDHQSRCISEFT
FRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIENLANPRGLCCLSHHMNTSVLAC
PGIRRGEVRVEHFGLNMVQIINAHDSNLACMTMTLDGLLLATASTKGTLIRIFNTMDGTR
LQEVRRGVDRADIYSIALSPNMQWLAVSSDKGTVHIFSLRVRVIGEDAYSTEHETSSNSM
QPLVSPASGANPGSSLSFLRGVLPKYFSSEWSFAQFHVPEVTQYFAAFGAQNTIAIIGMD
GSFYRCNFDPVNGGEMTQLEHFHFLKPDSPR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcgaagaaacttccaaccaggtggttatgactcccggaataccttcacttca
ggatcttttgggcctccagattttggtgaaagtgatgaagcagagttggtttctgtttct
tggaatcaggattacagctgttttgctgctggcaccagccatggttttcgtatatacaac
tgtgaaccgttcaaggaaactttcaggcgagagctgaagggtggagggtttaaaattgta
gagatgcttttccggagtaatatcttggcgcttgttggtggtggacctaactctcagtac
ccttcaaataaagtattgatttgggatgatcatcagagccgctgcatcagtgagtttact
tttcggtcggaaattcgtgcagtgaagttaagaagagatcgaattgtagttgttctcgag
cacaagatatatgtctacaattttatggatctaagacttcttcaccagattgaaaatctg
gcaaatccaaggggactatgttgcctctctcatcatatgaatacatctgtcctggcctgt
ccaggtattcgtcgaggagaggtccgagttgaacattttgggcttaacatggttcaaatc
attaatgctcatgattctaatctcgcgtgtatgaccatgacattggatggcttgctcctt
gcaactgccagtacaaagggaactctgattcgaattttcaacactatggacggaactcgt
ctgcaagaggtccgaagaggcgtggacagagcagatatctacagcattgctctatcacca
aacatgcagtggcttgcagtatcaagtgacaaggggactgttcacattttctctcttaga
gtgagggttattggggaggacgcatactccactgaacatgagacttcttcaaattctatg
cagcctcttgtttctccagccagtggtgccaaccccggttcgtcattgtcttttctgaga
ggagttctaccaaaatatttcagctcggaatggtcatttgctcagttccatgtaccagaa
gtcacccaatactttgcagcatttggcgctcagaacacaattgcgattattggcatggac
ggaagtttctacaggtgcaatttcgatccagtgaacggaggagagatgactcagcttgaa
catttccattttctgaagccagatagcccgagatag
DBGET
integrated database retrieval system