Arabidopsis lyrata (lyrate rockcress): 9312492
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Entry
9312492 CDS
T01578
Name
(RefSeq) polygalacturonase ADPG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Module
aly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9312492
Enzymes [BR:
aly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
9312492
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
9312492
NCBI-ProteinID:
XP_020879642
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MARCCRLLAVFLCVLLMLSLCEALSSNVDDGYGHEDGSFESDSLIKLNNDDVLSLKSSDE
TTLESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKSTRFRG
PCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNGKIWWQNSC
KIDKSKPCTKAPTALTLYNLKNLNVKNLRVRNAQQIQISIEKCNKVEVSNVVITAPGDSP
NTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSK
AYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQNYCDKDK
CEEQGSAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVNIKGGTASCKNANV
KNQGTVSPKCS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttgttgcagacttcttgctgttttcttatgcgttcttttgatgctctctttg
tgtgaagctttgagtagcaacgttgatgatggatatggtcatgaagatggaagtttcgaa
tccgatagcttgatcaagcttaacaacgatgatgttcttagcttgaaaagctccgatgaa
accactttggaatcatcaactgttagtgtttcaaacttcggagccaaaggagatggaaaa
accgatgatactcaggccttcaagaaagcatggaaaaaagcatgttcaacaaatggagtt
actactttcttaatacctaaagggaagacttatctccttaagtctactagatttagaggc
ccatgcaaatcactacgtaactttcagatcctaggcactttatcagcatctacgaaacga
tcagattacaaagacaaaaaccattggcttatcttagaggacgttaacaatctatcaatc
gatggtggctcgacggggattattaatggcaacggcaaaatctggtggcagaactcatgc
aaaatcgataaatctaagccatgcacaaaagcgccaacggctcttactttatacaatcta
aagaatttgaatgtgaagaatctgagggtaagaaatgcgcagcagattcagatttcaatt
gagaaatgcaacaaagttgaagttagtaatgttgtgatcactgctcccggcgatagtccc
aacaccgatggtatccatatcactaatactcaaaacattcgagtctccaactcagatatc
ggaacaggtgatgattgtatatccattgaggatggaacgcaaaatcttcaaatctttgat
ttaacttgcggccctggtcacggaatcagcattgggagcttgggggacgacaattcgaaa
gcttatgtctcgggaattaatgtggatggtgcaaagttctctgagagtgataatggagta
cggattaagacttatcagggaggatcagggactgccaagaacattaaatttcaaaacatt
cgaatggaaaatgtcaagaatccgatcataatcgaccagaactactgcgacaaggacaaa
tgcgaagaacaaggatccgccgtgcaagtgaaaaacgttgtgtacaagaacatatccggt
acaagcgcgacggatgtggcgataacgttgaattgcagtgagaagtatccatgccaaggg
attgtgcttgagaacgtgaacataaaaggaggaacagcttcttgcaaaaatgccaatgtt
aaaaatcagggcaccgtttctcctaaatgctcttaa
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