KEGG   Arabidopsis lyrata (lyrate rockcress): 9312521
Entry
9312521           CDS       T01578                                 
Name
(RefSeq) uncharacterized protein LOC9312521
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9312521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9312521
Enzymes [BR:aly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9312521
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    9312521
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Prok-RING_4 Baculo_IE-1 zf-ANAPC11 RING_XB3-XBAT31 Sina_RING zf-rbx1 zf-Nse
Other DBs
NCBI-GeneID: 9312521
NCBI-ProteinID: XP_020881120
LinkDB
Position
Unknown
AA seq 437 aa
MGEELADTMNLDLNLGPGPESDLQPAPNETVNLADWTNDPPDRSSEAVTRIRTRHRTRFR
QLNLPIPVLSETHTMAIELNQLMGSSVNGAALQTGEGSERGNEDLKMCENGDGALGDGVS
DKKADIEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKECPVCKG
EVTSKTVTPIYGRGNHKREIEESLDTKIPMRPHARRIESLRNTIQRSPFTIPMEEMIRRI
QNRFDRDSTPVPDFSNREASERVNDRANSILNRLMTSRGVRSEQNQASAAAAAIVAATED
IDLNPNIAPDLEGETNTRFHPLLIRRQLQSHRVARISTFTSALSSAERLVDAYFRTHPLG
RNHQEQNHHAPVMVDDRDSFSSIAAVINSESQVDTAVEIDSMVTHSTSSSRRRNENGSRV
SDVDSADSRPPRRRRFT
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgggtgaggagttagctgacacaatgaacctggatttgaatcttgggcctggtcctgag
tctgatctccaacctgcaccaaacgagactgtgaatttggccgattggactaatgacccg
cctgacagatcttctgaagctgtgacgaggatcaggactcgccataggacgcgattcaga
cagcttaatctccctatcccggttctatctgaaacccataccatggctatagaactgaac
cagttgatgggaagttctgtcaatggagctgctttgcagactggtgagggtagtgaaaga
ggcaatgaggatctgaaaatgtgtgagaacggcgacggagcccttggggacggtgtatcg
gataagaaagcggatatcgagaaaagcagtggcagcgacggtaactttttcgattgtaat
atatgtttggatttgtccaaggagccggttcttacatgttgtggccatctttactgttgg
ccttgtctgtaccaatggttacaaatttcggatgcaaaggaatgtccggtttgtaaagga
gaggtgacctccaaaaccgtgacaccgatctatgggcgtggaaaccacaaaagagaaatt
gaagagagtttagatactaagatccccatgagaccacacgcgagacgcattgagagcttg
aggaatacaattcaaaggtcgccttttacaataccgatggaagaaatgattagacgtata
caaaataggtttgacagggattcaaccccggtccctgattttagtaaccgcgaggcatcg
gaaagagtcaacgatcgagccaattcgatccttaaccggttgatgacatctaggggagtt
agatcagagcagaaccaggctagtgctgcagcagcagccattgtcgcagcaacagaggat
atcgatctgaatccaaacattgctcctgatcttgaaggagaaaccaacacgagattccat
cctctgttgataaggagacagttacagtcgcaccgagttgcaaggatctcgactttcact
tcagcgttgagttctgctgagaggcttgtagatgcgtattttaggactcatccattgggg
aggaaccaccaagagcaaaaccatcatgctcctgttatggttgatgatagagactcattc
tcaagcattgcagctgttataaactctgagagtcaagtggacactgcagttgagattgat
tctatggtcactcattcgacatcgtcttcgaggagaaggaatgagaatggttcgagggtg
tctgatgtagacagtgcagattctcgtccgcctaggagaaggagatttacttga

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