Arabidopsis lyrata (lyrate rockcress): 9312522
Help
Entry
9312522 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9312522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9312522
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9312522
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
9312522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_NOL10_N
zf-RING_6
zf-Di19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
9312522
NCBI-ProteinID:
XP_002876454
UniProt:
D7LVZ4
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNNKPTKPGSAGIGKYGIHSNNGVYELLE
CPVCTNLMYPPIHQCPNGHTLCSNCKVRVQNTCPTCRYELGNIRCLALEKVAESLEVPCR
YQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECAVTGDIPTLVVHLKDDHKVDMHDG
CTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEA
KKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLR
VTGRIWKEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgctttgaaagaagtcatggaatctaattcaacgggaatggat
tacgaggttaaaacggcaaaagtggaagttaataataataacaaacctacaaaaccaggg
agtgcagggattggaaaatatgggatccattcaaacaatggtgtttatgagcttcttgaa
tgtcccgtgtgtacaaatttaatgtaccctccaattcatcagtgcccaaatggtcacaca
ttatgttcaaactgcaaagtgagagtgcagaacacatgccctacatgtcgctatgagctt
ggtaacataagatgcttagctcttgagaaagttgcagagtctttggaagttccatgccgg
taccaaaatttggggtgtcatgacatttttccttactacagcaagcttaagcacgagcag
cattgcaggtttaggccttacacttgtccttatgctggttctgagtgcgcggttacaggt
gatatccccacacttgttgttcatctcaaagatgatcataaagtcgatatgcatgacgga
tgcaccttcaaccaccgttatgtaaagtcaaatccacatgaagtcgaaaatgctacatgg
atgcttacggtgttcaactgttttgggagacagttctgtttacacttcgaggcgttccag
ctgggaatggctccagtgtacatggcattccttcgtttcatgggagatgagaacgaggca
aagaagttcagttacagcctggaagtaggagctcatggacgtaaattaacatggcaaggg
atccctagaagcatccgtgacagtcacaggaaagtccgggacagtcaagacggactcatc
atcccaagaaacctcgcactctacttctctggaggtgataggcaagaactcaagttgaga
gtgaccgggcgaatctggaaagaggagtaa
DBGET
integrated database retrieval system
