Arabidopsis lyrata (lyrate rockcress): 9312598
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Entry
9312598 CDS
T01578
Name
(RefSeq) cysteine protease ATG4b isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
9312598
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9312598
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9312598
03029 Mitochondrial biogenesis [BR:
aly03029
]
9312598
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
9312598
Membrane trafficking [BR:
aly04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
9312598
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
9312598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
9312598
NCBI-ProteinID:
XP_020880247
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MKAICDRFVPSKCSSSCTSEKRDISPTSLVSDSPSSDDKSNLTLCSDVVESSSPVSQPCR
EASTSEHKQVCTTHNSWTVILKTASMASGAIRRFQDRVLGPSRTGISSSTSEIWLLGVCY
KISEAESFEEADAGRVLAAFRQDFSSLILMTYRRGFEPIGDTTYTSDVNWGCMLRSGQML
FAQALLFQRLGRSWRKKDSEPPNEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSW
VGPYAVCRSWESLARKNKEETDVKHKSFSMAVHIVSGSEDGERGGAPILCIEDVTKTCLE
FSEGDTEWPPILLLVPLVLGLDKVNPRYIPSLIATFTFPQSLGILGGKPGASTYIVGVQE
DKGFYLDPHDVQQVVTVKKENQDVDTSSYHCNTLRYVPLESLDPSLALGFYCQDKDDFDD
FCIRATKLAGDSNGAPLFTVTQSHRTNDCGIAETSSSTVISTEISGEEHEDDWQLL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctatatgtgatagatttgttccttcaaaatgttcttcatcatgcacaagtgaa
aagcgtgatatatccccgacatctctagtttcagattcaccgtctagtgacgacaagtca
aacttgacgttatgctcggatgtggttgagtcttcctccccagtttctcaaccgtgtagg
gaagcttcaacttccgagcataagcaagtttgcactacacataatagttggacagttatt
ttaaaaacagcttctatggcaagtggggcaattaggagatttcaagaccgtgtattaggg
ccgagtaggacgggtatttccagcagtacaagtgagatatggctcctgggtgtctgttat
aaaatctcagaggctgaatccttcgaagaagcagatgctggccgtgtattggctgcattc
agacaagatttttcatccttaatactaatgacatatcgtagaggttttgagcctattgga
gacacaacttatactagtgatgtaaactggggttgcatgcttcgaagtggccagatgctc
tttgcacaggcgttgctattccaaaggctgggaaggtcttggaggaaaaaggattccgag
cctccgaatgagaaatacttagagatcttagaactttttggtgatactgaggcttcagca
ttctcgattcacaatcttatactagctggagaatcctatggcctggctgctgggtcatgg
gtaggaccatatgctgtttgtcgatcatgggaatcattagctcggaagaacaaagaagaa
actgatgttaaacacaagtcgttttccatggctgttcatatcgtttctggcagtgaagat
ggagagagaggtggagctccaattctctgtattgaagatgtcaccaaaacttgtttggaa
ttttcagaaggggacactgagtggccgccaattcttctcttggtccctctggttctcggg
cttgacaaagtgaaccccaggtacattccgtctctgatagccactttcacattccctcaa
agcctcggcattttgggcggcaaaccaggtgcatcaacttacatagttggagttcaagaa
gacaaaggtttctaccttgatccgcatgatgttcaacaggtagtgacagtcaagaaagaa
aatcaagatgttgacacatcgtcttaccattgcaataccctccgttatgttccgcttgag
tcactcgacccgtcactagctcttggattctattgccaggacaaagatgatttcgatgat
ttctgtatccgagcaacgaagctagcgggggactctaatggcgctcctctctttactgtg
actcaatctcacagaacaaatgactgtggaattgcagaaaccagcagcagcacagtgata
tctacagagatctctggtgaggaacatgaagatgactggcaattactttga
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integrated database retrieval system
