Arabidopsis lyrata (lyrate rockcress): 9312711
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Entry
9312711 CDS
T01578
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9312711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9312711
Spliceosome [BR:
aly03041
]
Common components
Common spliceosomal components
SR proteins
9312711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_3
Nup35_RRM_2
SET_assoc
RRM_5
DUF2129
DbpA
RRM_fung
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
9312711
NCBI-ProteinID:
XP_020880837
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MRPVFVGNFEYETRQSDLERLFDKYGRVERVDMKSGYAFVYFEDERDAEDAIRKLDNFPF
GYEKRRLSVEWAKGERGRPRGDAKATSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKV
INVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRYGGRSPRR
SLSPVYRRRPSPDYGRRPSPDYGRRPSPDNGRARSPEYDRYKGPAAYERRRSPDYGRRSS
DYGRQRSPGYDRYRSRSPVPRGRP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagtgttcgtcggcaatttcgagtatgaaacgcgccagtcggatttggaacga
ttgttcgacaagtatgggagagtcgagcgagtggacatgaaatctggatatgcttttgtg
tactttgaggatgaacgtgatgctgaagatgcgattcgcaagcttgacaatttccctttt
ggatatgagaaacgcagattatcagttgaatgggcaaagggtgaacgtggcaggcctcgt
ggtgatgcgaaagccacttcaaatctgaagcctacaaagacactgtttgtcattaacttt
gaccccattagaacaaaagagcacgacattgaaaagcactttgagccctatggtaaggtc
atcaacgtgcgtatcagacgcaacttctcatttgttcagtttgaaacacaagaagatgcc
acaaaagcccttgaagctactcaaagaagcaaaatattggatagggttgtttctgtggag
tatgccttgaaggatgacgatgaaagagatgatcgatatggtggtcgtagcccgagaaga
tctcttagtcctgtgtaccgtaggcgtccaagtccagattatggtaggcgtccaagccct
gattatggtagacgtccaagtccagataatggtcgtgcacgaagcccagaatacgacaga
tacaaaggtccagcagcttatgaaagacgcaggagtccagattatggacgaaggagttct
gattatggtagacaaaggagtcctggttatgaccgatacagaagtcgttctccagtccca
agaggaagaccttga
DBGET
integrated database retrieval system
