Arabidopsis lyrata (lyrate rockcress): 9312736
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Entry
9312736 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9312736
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9312736
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9312736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
9312736
NCBI-ProteinID:
XP_002878444
UniProt:
D7LSV3
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MDDSCAVCADNLEWVAYGSCGHREVCSTCVVRLRFVLDDPRCCICKTESPIVFVTKALGD
YTRTITDFSTFPSAPREGRVGAFWYHEDTQAFFDDLDHYRMIKAMCRLSCGVCDKAEDQP
REGGPRHHRQRIKSVEQLKGHLYHKHKLHMCGLCLEGRKIFICEQKLYTRAQLNQHIHTG
DSEVDGSESERGGFAGHPMCEFCRNPFYGDNELYTHMSTEHYTCHLCQRSQPGQYEYYKN
YDDLEIHFRRDHFLCEDDSCLAKKFTVFQNESELKRHNAIEHGGKMSRSQRSAALQIPTS
FRYRRGNDQENRRGRPRSFRREPGDDEYNLAVHAALRLSEAEYSRQEPAPPPSSAPPGFS
ENNNIHVDDADPLIQPMESLSTTDMEPSSRYLQAVGSSGGGGTRLGESAFPPLSGQPRSG
QNVESLPTNTMAARLRRQTNRTTTASAIASPSQGWPVVNRCPAQASITSGGNHSSSGWPA
IGRTPVQASSSSVQSMSHTRVSQARPLAPAVSQATRNANRIPHSSSAPNLSDTRSLQPSH
SDFPPVSSAVVQNRKTSSTTTQGLSNTQPPPDVQSANKSLIEKMRSALGHDEDVFVAFRN
ISGQYRQGSIDAKTYLEYVKGYGLSHLVIDLARLCPDPKRQKELIDTHNAGLREEDSKEN
GRAAAQSSSQPKDSQSSKKNKGKAVKVADPKETLADNFMDTVRRLQSFQNPQEEEEVISK
DMNSYRSDKGKSQVTGADSSSTGNKQQRKKTSKFHRVRLGDGSMAALLDLNNSNREPEQE
SKDGNSNSNQNQTGGLPVRGVWRKGGANLFS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgtgccgtctgcgctgacaatctcgaatgggttgcctatggatcttgt
ggtcaccgtgaggtttgctccacttgcgtcgttcgtctccgattcgtcctcgacgatcct
cgctgctgtatttgcaagaccgagtctcctatcgtcttcgtcaccaaggcattgggtgat
tatacgaggacgatcactgacttctccaccttcccatcagcaccaagggaagggcgagta
ggagctttctggtatcatgaagacactcaggctttctttgatgacttggatcattacagg
atgatcaaagctatgtgtagactttcctgcggtgtttgtgacaaggcggaagatcaacca
agagaaggaggaccaagacatcatcgtcagaggattaagagcgttgaacagttgaagggt
catttatatcataagcacaaattgcatatgtgtggtttatgtctcgaagggcgaaagata
ttcatatgtgaacaaaagttgtatactagggcacaactgaaccaacacatacacactggt
gactctgaagttgatggaagtgagagtgaaaggggaggcttcgctggacatcctatgtgt
gaattctgtaggaatcctttctatggtgataatgaattgtatactcacatgtctacagag
cattacacatgtcatttatgtcaaaggtcacagccaggacaatatgaatattacaaaaac
tatgatgacttggagattcatttccgtagagaccatttcctctgtgaagacgactcctgc
cttgctaagaagttcacagttttccagaatgaatcagagttgaaaaggcataacgctatt
gagcatggaggtaaaatgtctcggtctcagcgaagtgctgcattacagataccaacaagt
ttccgataccgacgtggaaatgatcaagagaatcgtcgtggaagaccccgatcatttcgc
cgcgagcctggtgatgatgaatataatcttgcagttcatgccgctcttcgtttatctgag
gctgagtattctcggcaagagcctgctcctccaccctcaagtgcaccacccggattctct
gaaaacaacaacatacacgtggatgatgctgatcctcttattcagccaatggaatctcta
tcaactacagatatggagccctcttcacgatatcttcaagctgtaggaagctctggtggt
ggtggtacacgtcttggagaatctgcttttcctcctctttctggtcaaccgagatctgga
cagaacgtagagagtttacctactaacaccatggctgctcgtctaagacgccaaacaaat
cgaactactactgcttctgctattgctagtccttctcaaggatggccagtggttaaccga
tgcccagcgcaggcatctattacaagtggtggtaatcattcttcttcgggatggccagca
ataggtcgaacgcctgtacaagcctctagttcttcagtccaatctatgtcccataccaga
gtttcacaggctcgaccgctggctcctgcagtttcacaggctactcgtaatgcgaacagg
attcctcactcttcctcagcccctaatctatctgatacaagatcacttcagccttctcat
tcagattttcctccagtttcttctgctgttgtgcaaaatcgtaagacatcatccaccact
acgcagggattgtcaaacactcaaccccctccagatgtacaatctgccaacaagtcattg
attgagaaaatgcgttctgcacttggtcatgatgaagatgtatttgtggcattcaggaat
atatcaggacagtatcgtcaaggttcgattgatgcaaagacttatttggagtatgtgaaa
ggatatggattgtctcacttggttattgatcttgctagactgtgtcctgaccctaaaagg
cagaaggaactcattgatacccataatgccggtttgagagaagaagattcaaaggagaat
ggtcgggctgctgcccagagctcttctcaacctaaagatagtcaaagttcaaagaaaaac
aaaggaaaagctgtgaaagttgctgacccgaaagaaacattagcagataattttatggac
acagtaaggagattacaatcttttcagaatccccaggaagaagaagaggtgatatctaag
gatatgaattcttataggtcagacaaaggcaaatcacaagtaacaggcgctgattcttct
tcaaccggaaacaagcagcaacgtaagaaaacttccaagtttcacagagtacggcttggt
gatggatcgatggctgccttactagatcttaataattctaaccgtgagcctgaacaagaa
tcaaaggatggtaattccaacagtaaccaaaatcagaccggtggtttaccggttcgaggc
gtttggcgtaaaggaggtgcaaaccttttctcgtag
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integrated database retrieval system
