Arabidopsis lyrata (lyrate rockcress): 9312841
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Entry
9312841 CDS
T01578
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9312841
Spliceosome [BR:
aly03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
9312841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
9312841
NCBI-ProteinID:
XP_020882314
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MAIDCLVLGAGQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLVSKSGDFDNAI
SCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEDELF
TTAHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNM
TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFA
LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFD
FKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH
KLMSGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSM
MILKDKITSELDIPCFVPANGETVSVASTTYIKANASDMFLKSCSSPNFKFSNSTQLRVT
DQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKNHVVSLAYCCPVKVKGESDNDADLIKQL
SEKILKTVSGAQIHESENCLQIGSFKGTLCLKDKCVHRRDISSSSEAVVFFCCNWSAADL
ELGWEVINVMKQNI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgattgtctcgtactcggtgctggacaagagattggaaagagctgcgtagta
gtgacgattaatggtaaaaggataatgttcgattgtgggatgcatatgggctgcgatgat
cacaatcgttacccagatttttctctcgtctctaaatccggtgattttgataacgcgatc
tcttgtatcatcatcactcacttccatatggatcatgttggagcgcttccttacttcacg
gaagtttgtgggtacaatggcccgatttatatgtcgtatcccacaaaggctttgtctcca
ttaatgcttgaggactaccgaagagtgatggttgatagaagaggtgaggatgagctgttc
accactgcccatatcgcaaactgcatgaagaaagtaattgcaatagatttgaagcaaaca
attcaggttgacgaagatcttcaaatccgtgcctattacgcagggcatgtccttggagca
gtgatggtttatgcaaaggtgggagatgcagcgattgtgtacactggagattacaacatg
acgacagatagacatctaggagcagctaaaattgacagactccagttggatcttctcata
tcagagtccacatatgcaactaccattcgtggctcaaaatatccccgggagagagagttt
cttcaagctgttcataaatgtgttgctggcggagggaaggcgctgattccttcatttgct
cttggaagggctcaggaactctgcatgctgctcgatgattactgggagcgcatgaatata
aaggttccgatatacttctcatcaggtttgaccatccaagcaaatatgtattacaaaatg
ctcatcagctggacaagccagaatgttaaagagaagcacaatacacataacccatttgac
tttaagaatgttaaagattttgatcggtctcttatacatgctcctgggccatgtgttctc
tttgccacacccggtatgctttgtgctggcttctcacttgaagtgttcaagcattgggct
ccatctcccctgaatcttgttgccttgcccggatactctgtggctggaacagttgggcac
aaactgatgtctggtaaacccacgacggttgatctctacaatggcaccaaggtcgatgtc
cgttgcaagatacatcaagtggcattcagtcctcacacagatgcaaaaggaataatggat
ctcacaaagttcctttccccaaagaacgttgtactcgtgcacggcgaaaaacccagcatg
atgattcttaaggataagataacctcagagcttgacatcccctgtttcgtccctgccaat
ggcgaaacagtttcagtagcttcaaccacttatataaaagcaaacgcttctgatatgttc
cttaaaagctgctccagcccgaatttcaaattctcaaactctactcagctccgtgttaca
gaccagagaacagcagacggcgttttggtcatagagaagagcaaaaaggcaaagatagtt
caccaagatgaagtctctgaggtgttacatgagaaaaaccatgtggtctctttggcttat
tgttgtcctgtgaaagtcaagggagaatcagataatgatgctgatctgatcaaacaattg
tctgaaaagatcttgaagacagtgtctggtgctcagatccatgaatctgaaaactgtttg
cagattggatctttcaagggaactttgtgtctgaaagacaagtgtgtgcatagaagagat
ataagtagtagtagtgaagctgtcgtgttcttttgttgcaactggtctgctgctgattta
gaacttggttgggaagtcatcaatgtaatgaaacaaaacatatga
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