Arabidopsis lyrata (lyrate rockcress): 9312892
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Entry
9312892 CDS
T01578
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9312892
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aly04147
]
9312892
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
9312892
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
9312892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP120
TPR_CAND1
CandA_N
HEAT_EF3_N
TPR_DNAAF5
HEAT_GCN1
HEAT_EZ
HEAT_2
HEAT
TOR1L1_N
HEAT_ECM29
TPR_IMB1
HEAT_GCN1_C_2
HEAT_DAAF5
GNC1_N
RIX1
mTOR_dom
Htt_N-HEAT_1
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-GeneID:
9312892
NCBI-ProteinID:
XP_020881071
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MANLQVSGIIEKMTGKDKDYRYMATSDLLNELNKDSFKLDTDLEMRLSSIILQQLDDVAG
DVSGLAVKCLAPLVKKVGEERIVEMTNKLCDKLLHGKDQHRDTASIALRTVVAQVTPSLA
PSILVTLTPQMIGGISGQGMSSGIKCECLEIMCDVVQKYGSLMTDDHEKLLNTLLLQLGC
NQATVRKKTVTCIASLASSLSDDLLAKATVEVVKNLSNRNAKSEITRTNIQMIGALCRAV
GYRFGTHLGNTVPVLINYCTSASENDEELREYSLQALESFLLRCPRDISPYCDEILNLTL
EYISYDPNFTDNMEEDTDNETLEDEEDDESANEYTDDEDASWKVRRAAAKCLAGLIVSRS
EMLAKVYQEACPKLIDRFKEREENVKMDVFNTFIDLLRQTGNVTKGQTDTDESSPKWLLK
QEVSKIVKSINRQLREKSVKTKVGAFSVLRELVVVLPDCLADHIGSLVPGIERALNDKSS
TSNLKIEALVFTKLVLASHAPPVFHPYIKALSSPVLAAVGERYYKVTAEALRVCGELVRV
VRPSTAGMGFDFKPFVHPIYNAIMSRLTNQDQDQEVKECAITCMGLVISTFGDHLRAELP
SCLPVLVDRMGNEITRLTAVKAFAVIATSPLHIDLSCVLDHLIAELTGFLRKANRVLRQA
TLITMNTLVTAYGDKIGSDAYEVILVELSSLISVSDLHMTALALELCCTLMTGKSCSENI
SLAVRNKVLPQALTLVKSPLLQGQALLDLQKFFEALVYHANTSFYTLLESLLSCAKPSPQ
SGGVPKQALYSIAQCVAVLCLAAGDKNCSSTVKMLMEILKDDSGTNSAKQHLALLSLGEI
GRRKDLSAHAGIETIVIESFQSPFEEIKSAASYALGNIAVGNLSNYLPFILNQIDNQQKK
QYILLHSLKEVIVRQSVDKADFQNSSVEKILALLFNHCESEEEGVRNVVAECLGKMALIE
PEKLVPALQVRTTSPAAFTRATVVTAVKYSVVERPEKLDEIIFPQISSFLMLIKDGDRHV
RRAAVSALSTFAHYKPNLIKGLLPELLPLLYDQTVIKKELIRTVDLGPFKHVVDDGLELR
KAAFECVFTLLDSCLDQVNPSSFIVPFLKSGLEDHYDLKMLCHLILSLLADKSPSAVLAV
LDSLVEPLHKTISFKPKQDAVKQEHDRNEDMIRSALRAISSLDRINGVDYSHKFKGLMGD
MKRSVPLWEKFQTIRNE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttacaagtgtctgggataatcgaaaagatgacgggtaaagataaagattac
agatacatggcaacctctgatttgcttaatgagttgaataaggattcctttaaacttgac
acggacttggagatgagattgtcgagtatcatattgcaacagctcgatgatgtggctggt
gatgtttctggattggctgttaaatgtcttgccccattggtgaagaaggttggagaagaa
cgaattgtcgaaatgaccaacaaattatgtgataaactgctgcatgggaaagaccagcat
cgtgataccgcaagcatagctctcaggactgttgtcgcccaagttactccgtcgcttgct
ccatctattcttgttactttaaccccacaaatgataggagggataagtggccagggaatg
agctcagggattaagtgtgaatgtcttgagatcatgtgtgatgttgttcaaaaatatgga
agtttaatgacggatgatcacgagaagctattgaacacattgctattgcaattgggctgt
aaccaagccacagtcaggaagaagactgttacatgcattgcatctcttgcttccagtctg
tctgatgatttgctcgcaaaggcgacagttgaagttgtgaaaaatctaagtaacaggaat
gcaaaatcggagattacacgtaccaatattcaaatgattggagctttatgccgtgctgtt
gggtaccgatttgggactcatctaggtaacactgtgccagtattaattaattactgcacc
agcgcttcagaaaatgacgaggagcttcgcgagtatagcttacaggcacttgaaagtttc
ttgctacgatgtcccagggacatctcaccatattgtgatgaaattttaaatctcactttg
gaatatattagttatgacccgaattttacggacaacatggaggaagatactgataatgag
actcttgaagatgaagaagatgacgagagtgcaaatgagtacacagatgatgaggatgcc
agctggaaagttaggagagcagcggcgaaatgcctagcaggattaatcgtttctcgttct
gagatgctcgctaaagtatatcaagaggcctgcccgaaactaattgatagatttaaggaa
agagaggaaaatgtgaagatggatgtattcaacacattcattgatctgttacggcaaaca
ggaaatgttacaaaaggtcaaactgacactgatgaatcaagtccaaaatggctactgaag
caagaagtctcaaagattgtgaaatccataaataggcaactacgtgaaaagtctgttaag
acaaaggttggtgcattctccgttttgagagaacttgttgttgtcttgcctgactgcctt
gctgatcatattggttcacttgttcctggaattgaaagggcgctaaatgataaatcttct
acttcaaacttgaaaattgaagctcttgtcttcaccaaattagtcttggcatcacatgcg
cctcctgtttttcatccttatattaaggctctttcaagtcctgttttagctgctgttggt
gaacgctattataaggtgaccgctgaggcattaagggtttgtggggaacttgtcagagta
gtacgcccaagtactgcgggaatgggctttgattttaaaccgtttgttcatccaatctac
aatgcgataatgtcgcggttgacaaatcaagatcaggaccaggaagtcaaggagtgtgct
atcacctgtatgggtcttgtgatttcaacatttggtgatcatttgagagcagagttacct
tcatgccttcctgtgcttgttgatcgaatgggaaacgaaatcactcgcctcactgcagta
aaggcatttgcagtcattgccacttctccccttcacattgatctatcatgtgtcttggac
catttgattgctgaactaacgggattcttacggaaggctaatcgggttctaaggcaagca
acactgattactatgaataccttggtaacagcctacggtgataaaattggctcagatgct
tatgaagttattcttgtggagctttcatctctgattagtgtttcggacctgcacatgaca
gctcttgcactcgaactctgctgcactctgatgaccggaaagagttgtagtgaaaatatc
agtttggcggttcgcaacaaagttcttccgcaggcactaactttagttaaaagcccattg
ctccagggtcaagcacttttggatctgcaaaaattctttgaagctctggtgtatcatgca
aatacgagtttctacaccttgctggaatcattgctatcttgtgctaagccttctcctcag
tctggaggtgttccaaagcaagcattatattcaattgcacagtgtgtggcggttctttgt
ctcgcagcgggtgataagaattgttcgtctactgttaaaatgcttatggaaatccttaaa
gatgacagcggcacaaattcagcaaaacaacatcttgccctgttatctcttggtgagatt
gggagaaggaaagatctcagcgcacatgctggcattgaaacaatcgtcattgagtctttc
caatctccgtttgaagaaataaagtctgcagcttcgtatgctcttggaaacattgctgtt
ggcaatctttccaattatttaccttttatcttgaaccagattgataatcaacagaaaaaa
cagtatattctccttcattcactcaaggaggttattgtgaggcagtctgttgataaagcg
gatttccaaaattccagtgttgagaaaatacttgctttactgtttaaccattgtgaaagc
gaggaagaaggtgtaaggaatgttgttgctgaatgcttgggaaaaatggctttgatagag
cctgagaaattggttcctgctcttcaggtaaggacgacgagtccagctgcttttactcgt
gcaactgttgttaccgctgtgaaatattcagtagtggaacgacctgagaaattagatgaa
atcatcttccctcagatttcttctttcctcatgctgattaaagatggtgaccggcatgtt
aggcgtgcagctgtctcagctctgagtacttttgctcattataaaccaaaccttattaaa
ggacttctccctgaattgttaccgcttctttatgatcagaccgttattaagaaagaatta
attaggacggttgatcttggcccattcaagcatgtcgttgatgacgggcttgagctgagg
aaagcagcttttgagtgtgtgtttactctgctcgatagctgtcttgatcaagtgaatccg
tcttctttcattgttcctttcctcaaatccggactagaagatcattatgacctgaagatg
ctttgtcatcttatactctccttgctagcagataaatccccctcagccgtacttgctgta
ctggattctcttgtggaaccactgcataaaacaataagcttcaagccaaagcaagatgca
gtgaagcaagagcatgatcgtaatgaagatatgatcagaagtgctcttcgtgctatatcg
tcactggatcgtatcaatggggtggattatagccacaagttcaagggcttaatgggtgac
atgaagaggtctgtaccattgtgggaaaagtttcagacaatccggaacgagtaa
DBGET
integrated database retrieval system
