Arabidopsis lyrata (lyrate rockcress): 9312937
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Entry
9312937 CDS
T01578
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9312937
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
9312937
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
9312937
NCBI-ProteinID:
XP_002875187
UniProt:
D7LQE3
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MAYSRNIYDNNGAGLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGC
DERVVTIYSNSEETNRIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQT
VTVRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVINDNLPICALALSHDELLQIIGDP
SAVREALYQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITSSHKNYSAPRDAAD
ARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFF
EDQSPTVNAALRLQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTK
ANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANVFDMDRGLVLLPTFF
PYISQTIETSSKPRHRKGENHPHGSEEIARNEDYGSQTNLKSPRRNRVY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcttattcaaggaacatttatgataataatggtgctggattagaagatactgtgtat
cgttacttgtgtcctgtgaggaaagcagggagtattattgggagaggtggtgaaattgca
aagcagattaggtctgagacgaaagcaaacatgaggataaacgaggctttaccgggttgt
gatgagcgtgttgttactatatattctaatagcgaggagaccaatcgtattgaagatgat
gaggattttgtttgtcctgcttttgatgctcttttcaaggttcatgatatgattgttgct
gaagaatttgacaatgatggtgattatgataacggtgatgagtatagtgagagacaaaca
gttactgtgaggatgcttgttccttcggatcaaattggttgccttattgggaaaggtgga
caagttattcaaaaactgcgtaatgacactaatgctcagattcgtgttataaatgataat
cttcccatttgtgctttggctttgagtcatgatgagcttcttcagataattggagatcct
tctgctgttagagaagctctttaccaagttgcctttctgctttatgataatccatcacga
tttcagaactactttctgtcttcttctagtaccctgcagcatcaacctggtggaattcta
atgagtcctgcaataacgagttctcacaaaaattactctgcaccaagagatgctgccgat
gcaagagtgttttctatctgcttcatatgtccagctgaaaatgttggaggtgtaatagga
aaaggtggctgtttcattaatcagactaggcaagaatctggtgcgaccatcaaagtccat
accccagaaactgatgaagatgatgattgcataattttcatatcagcaaaggagttcttc
gaagatcaatccccaacggtgaatgcagccttacgcttacaaacgcgatgcagtgagaaa
gtggggaaagattcaagtgattctgcaatctctactcgtgtacttattccaagttctcaa
gtagggtgcctcattggaaaaggtggagctcttatatccgagatgaggagtgtcacaaaa
gcgaacatccgcatttttcaaggcgaagatgtaccaagaattgctcgtgagaatgaggag
atggtccaaataacaggaagtcttgatgcagcaatcaaagctcttacgcaagtgatgctg
cgattaagagccaatgtatttgacatggatcgtggtcttgtcttgcttccaactttcttt
ccttatatttctcaaacaatagagacttcaagcaagcctaggcatagaaaaggcgagaac
catcctcatggttccgaggaaattgctaggaatgaagactatggtagtcaaacgaactta
aagtccccaagaagaaaccgagtttattga
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