Arabidopsis lyrata (lyrate rockcress): 9313054
Help
Entry
9313054 CDS
T01578
Name
(RefSeq) WD repeat-containing protein LWD2
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
9313054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9313054
03036 Chromosome and associated proteins [BR:
aly03036
]
9313054
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9313054
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
9313054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
9313054
NCBI-ProteinID:
XP_002875329
UniProt:
D7LR76
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MVTSSDQIQNGSDEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEI
VQLDESNGEIQSDPNLCFEHPYPPTKTSFIPDKECQSPDLLATSSDFLRLWRISDDESRV
ELRSCLSSDKNNEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKE
VYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT
VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICTAGDDSQALIWDISSM
GQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgagcagcgatcaaatccaaaatggttccgatgagcaatcaaaaagatcagag
atttacacatacgaagcaccatggcagatctacgcaatgaactggagcattcgtcgagac
aagaagtatcgactcgcaatcacaagcctcatcgagcaatatccgaatcgagtcgaaatt
gttcagcttgacgaatcaaatggtgagattcaatcagatccaaatctttgcttcgagcat
ccttacccaccaacgaaaaccagtttcattcccgataaagaatgtcaaagtcccgatctt
ttagctacttctagtgattttcttcgtttatggcgaatctctgatgatgaatctcgtgtt
gagcttaggtcttgtcttagtagtgataagaataatgagtttagtggtccaattacttca
tttgattggaatgaagctgagcctagacgaattgggacttctagtattgatacgacttgt
actatttgggatatagagcgtgaagttgttgatactcagcttattgctcatgataaagag
gtttatgacattgcttggggtggagttggtgttttcgcctctgtttcagaagatggttcc
gttagagtgttcgatctccgtgataaggagcattcgacgattatctatgagagtggcgag
ccgagtactcctttggtgcggcttagttggaacaagcaggatccgaggtatatggctact
gttatcatgggcagtgctaaaattgtggtgttggatattcggtttccggctcttcctgtt
gtggagcttcagcgacatcaggctagtgtcaatgctatagcttgggctcctcatagctct
tcccacatctgcactgctggagatgattctcaggcgttgatttgggatatttcttcaatg
ggacagcatgttgaaggtggtttggatccgattctggcttacacagccggcgctgaggtt
gagcagctgcaatggtcttcttcccagcctgattgggttgccattgccttctctaacaag
ctgcagattctcagggtctga
DBGET
integrated database retrieval system
