Arabidopsis lyrata (lyrate rockcress): 9313134
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Entry
9313134 CDS
T01578
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9313134
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
9313134
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
ASA1
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_IFT140_1st
PAC11
MIOS_WD40
WD40_RFWD3
TRM82_WD
Beta-prop_HPS5
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
9313134
NCBI-ProteinID:
XP_020879782
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MESSRSRSVFANIGLRELNGFRVRKRPFFADSELICREIAGVAVEHDGIRTPPLAVSFCK
TSRNSQLFAVSDEDGHVSLFNSSKKFASSATHQENTENARFRDWIAHYNAIFDISWIKRD
SCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL
RCKSSSHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLYLKDEITIATAGAPD
SALKFWDTRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTFLTASCKDNRIYLYN
TLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGH
DFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNRCTNTNATASVSRVKRRVTAFSNTEA
KERLEMNRETESPQKHSSLLDDDYINNDQSTPIIRTPESQKKTSSSSSSSLSSLSSLSSL
SSSEEDIMCERTPETTFNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaatcctccagatctagatccgtcttcgccaacatcggactcagagagctcaacgga
tttcgagtacggaagcgaccgttcttcgcagattccgagctcatttgcagagaaatcgcc
ggcgtggcggtggaacacgacgggattcgaaccccgccgttggccgtttccttttgtaag
actagccggaattctcaattattcgcggtatctgatgaagacggccatgtgagcttgttt
aattccagtaagaagtttgcctcttctgcaactcaccaagagaatacagagaatgctaga
tttcgtgattggattgctcattataacgcgatattcgacatttcttggatcaagagagat
agttgtcttctaactgcttctggtgatcaaactattaaagtgtgggatgtagaggagaat
aagtgtactggagttcttataggacatacaggaactgtaaaatcaatgtgttcacatcca
acgaattctgatcttcttgtatctggttcgagagatggatgttttgctttgtgggattta
agatgtaaaagtagctctcacaaagaggaattttgtatcaactccactggcatggttaaa
ggagctcatctatcccctctttcaaaacgaatcagacgtcgcaaggctgcttcgtcaagc
attacctctgtgctttatctcaaggacgagatcacaattgctactgctggagctccagat
agtgccttgaaattttgggatacaaggaagctgaaagctccttttgctcaagcctctcca
cagtcagacccaacaaacacaaaggaaaagagatcacatggtatagtatccttgtcccag
gactcaagtggaacctttctcacagcatcatgcaaggacaatagaatctatctatacaac
accctgcggcttgacaaaggacctgtacaatctttctctggctgccgaatagattctttt
ttcgtaaggacaatgattagtcctgatggtgagtatgttttgagtggttcaagcgatgga
aacgcttacatatggcaggtcaataaacctcaagtagatcctataatcttgaaaggccat
gactttgaagttactgcagtagattggtctccatcggagattgggaaagttgcaacggct
tcagatgatttcacggtacgactatggaacatagagaacaaccgctgcacaaacacaaac
gcaacagcgtctgtgtctagagtcaaacgcagagtaaccgcattttcaaacactgaagcc
aaagaaagactagagatgaacagagaaactgagagtccccaaaagcattcatcattatta
gatgatgattatattaataatgatcagtcaacgcctatcattagaactccagagtctcag
aagaaaacatcatcatcatcatcatcatcattgtcatcattatcatcattatcatcatta
tcatcatcagaagaagatataatgtgcgagagaacaccagaaaccacattcaacagtcca
tcctctgtactaaatcctccttcctcagtcaaaaggcgaaccattagagattattttctt
gtcactccctaa
DBGET
integrated database retrieval system