KEGG   Arabidopsis lyrata (lyrate rockcress): 9313134
Entry
9313134           CDS       T01578                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aly04121]
    9313134
Ubiquitin system [BR:aly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     9313134
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_Aladin WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR75_1st Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd ASA1 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_IFT140_1st PAC11 MIOS_WD40 WD40_RFWD3 TRM82_WD Beta-prop_HPS5 Beta-prop_WDR11_1st Beta-prop_WDR75_2nd WD_LRWD1
Other DBs
NCBI-GeneID: 9313134
NCBI-ProteinID: XP_020879782
LinkDB
Position
Unknown
AA seq 523 aa
MESSRSRSVFANIGLRELNGFRVRKRPFFADSELICREIAGVAVEHDGIRTPPLAVSFCK
TSRNSQLFAVSDEDGHVSLFNSSKKFASSATHQENTENARFRDWIAHYNAIFDISWIKRD
SCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL
RCKSSSHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLYLKDEITIATAGAPD
SALKFWDTRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTFLTASCKDNRIYLYN
TLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGH
DFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNRCTNTNATASVSRVKRRVTAFSNTEA
KERLEMNRETESPQKHSSLLDDDYINNDQSTPIIRTPESQKKTSSSSSSSLSSLSSLSSL
SSSEEDIMCERTPETTFNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggaatcctccagatctagatccgtcttcgccaacatcggactcagagagctcaacgga
tttcgagtacggaagcgaccgttcttcgcagattccgagctcatttgcagagaaatcgcc
ggcgtggcggtggaacacgacgggattcgaaccccgccgttggccgtttccttttgtaag
actagccggaattctcaattattcgcggtatctgatgaagacggccatgtgagcttgttt
aattccagtaagaagtttgcctcttctgcaactcaccaagagaatacagagaatgctaga
tttcgtgattggattgctcattataacgcgatattcgacatttcttggatcaagagagat
agttgtcttctaactgcttctggtgatcaaactattaaagtgtgggatgtagaggagaat
aagtgtactggagttcttataggacatacaggaactgtaaaatcaatgtgttcacatcca
acgaattctgatcttcttgtatctggttcgagagatggatgttttgctttgtgggattta
agatgtaaaagtagctctcacaaagaggaattttgtatcaactccactggcatggttaaa
ggagctcatctatcccctctttcaaaacgaatcagacgtcgcaaggctgcttcgtcaagc
attacctctgtgctttatctcaaggacgagatcacaattgctactgctggagctccagat
agtgccttgaaattttgggatacaaggaagctgaaagctccttttgctcaagcctctcca
cagtcagacccaacaaacacaaaggaaaagagatcacatggtatagtatccttgtcccag
gactcaagtggaacctttctcacagcatcatgcaaggacaatagaatctatctatacaac
accctgcggcttgacaaaggacctgtacaatctttctctggctgccgaatagattctttt
ttcgtaaggacaatgattagtcctgatggtgagtatgttttgagtggttcaagcgatgga
aacgcttacatatggcaggtcaataaacctcaagtagatcctataatcttgaaaggccat
gactttgaagttactgcagtagattggtctccatcggagattgggaaagttgcaacggct
tcagatgatttcacggtacgactatggaacatagagaacaaccgctgcacaaacacaaac
gcaacagcgtctgtgtctagagtcaaacgcagagtaaccgcattttcaaacactgaagcc
aaagaaagactagagatgaacagagaaactgagagtccccaaaagcattcatcattatta
gatgatgattatattaataatgatcagtcaacgcctatcattagaactccagagtctcag
aagaaaacatcatcatcatcatcatcatcattgtcatcattatcatcattatcatcatta
tcatcatcagaagaagatataatgtgcgagagaacaccagaaaccacattcaacagtcca
tcctctgtactaaatcctccttcctcagtcaaaaggcgaaccattagagattattttctt
gtcactccctaa

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