KEGG   Arabidopsis lyrata (lyrate rockcress): 9313157
Entry
9313157           CDS       T01578                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    9313157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    9313157
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     9313157
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 9313157
NCBI-ProteinID: XP_020880955
LinkDB
Position
Unknown
AA seq 1466 aa
MGVQGLWELLAPVGRRVSVETLANKRLAIDASIWMVQFIKAMRDENGDMVQNAHLIGFFR
RICKLLFLRTKPIFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKDIRLK
EQAKDIKNQRLKQDDSDRVKKRVSSDSVEDNLRVPEEEKLDEVSPASLVGEENGVDDIVK
ELTKDDPKGKGVLLDGDDLDNKMKSNLEQDSSVQGKDYQEKLDEMLAASLAAEEEGNFTS
KASTSAAAIPSEEEDEDEDSDEDEEILLPVMDGNIDPAVLASLPPSMQLDLLVQMREKLM
AENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSRIASEAN
REFIFSSSFAGDKEELASAREGRNDENQKKTSQQSLPVPVKNASSVKKSDATIELDRDEP
KNPDENIEVYIDERGRFRIRNRHMGIQMTRDIQRNLHLMKEKERTASGSMANNDETFSAW
ENFPTEDQFLEKSPVEEDVVNLEIQNDDSMLQNPSSIEISFDHDGGGKDLNDEDDMFLQL
AAGGPVTISSTENDPKEDSSPWASDSDWEEVPVEQNTSLSKLEANLSNQHIPKDISIDEG
VAWEEYSCENANSSMENDTVTKITKGYLEEEADLQEAIKKSLLELHDKESGDVLEENQSV
RVNLVVDKPSEDSLCSRETVVEAEEEGFLDEITILKTSGAIREQSNTSVAGNADGQKGIT
KQFGTHPSSGSNNVSRAVSNELSKVKSVISPEKALNVASQSRMLSTMAKQHNEEGSESFG
GESVKVSATPIADEERTGFLGEKGNADGESSIMMYKRDYSRRKIQSLVTESRDPSLDVVR
SQIGILHDTDSQNERSEENNSNEHTFNIDSSTDFEEKSVPVEFSEANIEEEIRVLDQEFV
SLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVT
DDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSDYTEGISG
IGIVNAIEVVTAFPEEDGLHKFREWVESPDPTILGLKIKKRGSGSVDNKGIISGASTDDT
EEIKQIFMDQHRKVSKNWHIPSTFPSEAVISAYLNPQVDRSTEKFSWGKPDLSVLRKLCW
EKFNWNSKKTDDLLLPVLKEYEKRETQLRMEAFYSFNERFAKIRSKRINKAVKGIGGGLS
SEVADSTLQEGPRKRNKKRVAPHETEDNTTSDKDSPKANEKVKNKRKRLEKPSSSRGRGR
AQKRGRGRVQKDLLELSDGTSDDDDKDLEAKPSNLQKVRKSTRSRNPVKYNAKEDDELDE
SRSNGESLSEHFEEVDEGRIGNVSEERTQKEASINDCPSEDYIQTGGGFCAGEADEIGDA
HLKDKATDDYRVIGGGFCVDEDETAEEDATDDAEMLKMESEERRKKGKRRNEEDASLEEN
VEIGFGNSSTEGLSAMPFLKRKKRKN
NT seq 4401 nt   +upstreamnt  +downstreamnt
atgggagtgcaaggtctttgggagcttcttgctcctgtaggtcgtcgcgtctccgtcgaa
accctagccaacaaacgattagccatcgatgcgagtatatggatggtacaatttatcaaa
gcgatgcgtgacgagaatggagatatggttcagaacgcacacttgatcggatttttccga
aggatttgtaagcttttgttcttaaggactaaaccgatcttcgtctttgatggagctact
ccggcattgaaacgtcgtactgttattgctcgtcgtcgtcaacgtgagaatgctcagact
aaaatcagaaaaaccgctgagaaattgctgcttaatcggcttaaggatattaggcttaag
gaacaagctaaagatattaagaatcaaagattgaagcaggatgatagtgatagagttaag
aaacgtgtatcttctgattctgtggaagataatttgcgagttcctgaggaggagaagcta
gatgaagtatctccagcatctttggtgggagaggagaatggtgttgatgatatcgtcaaa
gagctcacgaaggatgatcccaagggaaagggagttttgttggatggggatgacctagat
aacaaaatgaagagtaatcttgaacaggattcctcagtacaggggaaggattatcaggaa
aagttggatgagatgttggcggcatcccttgcagctgaagaagaaggaaactttaccagc
aaagcatcaacttcagctgcagcaatcccgtctgaggaagaggatgaggacgaggacagc
gacgaagatgaggaaattttattgccagtaatggatgggaatatcgacccagctgttttg
gcttctctccctccatccatgcaacttgatctccttgttcagatgagagaaaaattgatg
gcagaaaaccggcaaaagtaccaaaaggtcaagaaggcccctgagaagttttctgaattg
caaatagaagcatatcttaaaactgtagccttccgtcgggaaataaatgaagttcagaga
tctgctggtggaagggctgttggtggagttcaaacttctaggatagcttcggaagcaaac
agagaatttatattctcgtcttcttttgctggtgataaagaagaactggcgtccgccaga
gaaggaagaaatgatgaaaatcaaaagaaaacgtcacaacagtctttgccagtccccgtc
aagaatgcttcctcggtgaaaaaatcagatgctaccattgagttggatagagatgaacct
aaaaatcctgatgaaaatattgaagtatatatagatgaaagggggcgttttagaataagg
aacagacacatgggaatccaaatgacgcgtgatatccagaggaacttacatttgatgaaa
gaaaaggagagaacagcttctggttctatggctaacaatgatgaaacattcagcgcctgg
gagaactttcctactgaggaccagtttcttgaaaaatcacctgttgaggaagatgttgtg
aacctggagatccagaatgatgattccatgctgcaaaatccatcttcaatagagatatca
tttgaccatgatggtggtggaaaagatctcaatgatgaagatgatatgtttcttcaattg
gcagcgggaggaccagtgacaatcagttctacagaaaatgatcctaaagaagactcttca
ccgtgggcttctgacagtgattgggaagaagtgcctgttgaacagaatacttctctctct
aagcttgaagcgaatttaagcaatcagcatatccccaaggatattagtatcgatgagggt
gtagcatgggaagaatatagttgtgaaaatgccaatagctccatggagaatgatacagta
acaaagatcacaaaaggctatctggaagaagaagctgatctgcaggaggctatcaagaaa
agtcttcttgaattacacgataaggaatctggggatgtccttgaagaaaatcaatcagta
agggtaaatcttgttgttgacaagccaagcgaagatagtctttgttctagggaaaccgtt
gttgaagctgaggaagagggatttctggacgaaataacaatcttgaaaaccagtggtgct
ataagggaacagtccaacacgtctgtagcgggcaatgcagatggtcagaaagggataacc
aaacaatttggtacacacccttcttccggttctaataacgttagccgtgctgtgagcaat
gaattgtcaaaggtaaaatcagttatctcacccgagaaagcattaaatgttgctagtcaa
agccgcatgctatccaccatggctaaacagcacaatgaagaaggttctgaaagttttggt
ggagaatctgtcaaagtatctgctacgcccatagctgatgaggaaagaactggttttctt
ggtgaaaaaggtaatgctgatggtgaatcatctatcatgatgtataagagagattatagt
agacgtaaaatccagagtcttgtcactgaatcaagggacccttctcttgatgtcgtcaga
tcgcaaatagggatactacatgacacagattcacaaaatgaaagaagcgaggaaaataac
tctaacgagcacactttcaatattgacagttcaacagattttgaagagaaaagcgtgcct
gttgaattttcagaagcaaatattgaggaggaaattcgagttctcgaccaagaattcgta
agtttaggtgatgaacagagaaaacttgagcggaatgctgaatctgtgagcagtgagatg
tttgcagaatgccaggagctactccaaatttttggcataccgtacatcatagctcccatg
gaagcagaggcacaatgtgcgtttatggaacaatcaaaccttgttgatggcattgtcact
gatgattctgatgtattcttgtttggagcaaggagcgtgtacaaaaatatatttgatgat
cgcaaatatgtggagacatactttatgaaggacattgagaaggagctaggcttgagcaga
gataaaataatccgcatggcaatgcttctaggaagcgattacacagaaggaatcagtggt
attggtattgtcaatgctattgaagttgtgactgcatttcccgaagaggatgggcttcat
aaatttcgtgagtgggttgaatcacctgatccaaccattttaggtttgaagataaagaag
cgggggtctggctctgtagataataaaggaatcatctcaggtgcctcgactgatgacact
gaagaaataaagcaaatcttcatggatcagcataggaaggtaagcaagaactggcatatt
ccatcgactttccctagtgaggctgttatttcagcctacttaaatccacaagtggatcgg
tcgactgagaaattctcatggggcaagcctgatctatcagttcttagaaagctatgctgg
gaaaagtttaattggaacagcaagaaaacagatgatctactactaccagtcttgaaggag
tatgaaaagcgagagacgcaacttcggatggaagctttctattcctttaatgaaagattt
gcaaagatccgtagtaaaagaatcaacaaagctgtcaaaggaattggcggaggtctatcg
tcagaagtggctgatagtactctccaggaaggtccaagaaaacgaaataagaaaagagtt
gctcctcatgaaactgaagataacaccacttctgacaaagattcacctaaagccaatgag
aaagtgaaaaacaaaaggaagcggttagaaaaaccatctagtagtagaggcagaggcaga
gcccagaaaagaggaagaggaagagtccaaaaagatctccttgagctatcagacggcact
tctgatgatgatgacaaggatttagaggcaaaaccgagcaatcttcaaaaagtgcgaaag
tcaacacgatctcggaatcctgtgaagtacaatgcaaaagaagatgatgaattggacgag
tcaagaagcaatggagaatcccttagtgagcatttcgaagaggttgatgaaggcagaata
ggaaatgtctctgaagaaagaacacagaaagaagcatcaatcaacgattgtccatctgaa
gactatattcaaacgggaggtgggttttgtgcaggtgaagctgatgagattggagacgct
catctgaaagataaagctacggatgattacagagtgatcggtggcggattctgtgttgat
gaagatgaaacagctgaggaagacgcaacggatgatgcagagatgctaaagatggagagt
gaagaacgacgaaagaaaggtaaacgtcgaaatgaagaagatgcatcattggaagagaat
gttgagattggttttgggaattcttcaactgaaggattaagtgctatgcctttcttgaag
agaaaaaagagaaaaaactga

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