Arabidopsis lyrata (lyrate rockcress): 9313205
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Entry
9313205 CDS
T01578
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
9313205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9313205
04147 Exosome [BR:
aly04147
]
9313205
04090 CD molecules [BR:
aly04090
]
9313205
Enzymes [BR:
aly01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
9313205
Transporters [BR:
aly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
9313205
Exosome [BR:
aly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
9313205
CD molecules [BR:
aly04090
]
Proteins
9313205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
DUF87
AAA_15
nSTAND1
AAA_23
AAA_30
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
9313205
NCBI-ProteinID:
XP_002877137
UniProt:
D7LM51
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MSEPNTTDAKTVPTEAEKKKEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFL
LFGQMVNGFGKNQMDLHQMVHEVSKYSLYFVYLGLVVCFSSYAEIACWMYSGERQVAALR
KKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVG
FVSAWKLALLSVAVIPGIAFAGGLYAYTLTGITSKSRESYANAGVIAEQAIAQVRTVYSY
VGESKALSSYSDAIQYTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTD
GGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQKPTIIQDPLDGKCLDQ
VHGNIEFKDVTFSYPSRPDVMIFRNFNIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPN
SGQILLDGVEIKTLQLKFLREQIGLVNQEPALFATTILENILYGKPDATMVEVEAAASAA
NAHSFITLLPKGYDTQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDASSES
IVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYASLIR
FQEMVGTRDFSNPSTRRTRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMISNA
ETDRKTRAPENYFYRLLKLNSPEWPYSIMGAIGSILSGFIGPTFAIVMSNMIEVFYYTDY
NSMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFD
EDEHNSSLIAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTF
PLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQSKILSLFCHELR
VPQKRSLYRSQTSGFLFGLSQLALYGSEALILWYGAHLVSKGVSTFSKVIKVFVVLVITA
NSVAETVSLAPEIIRGGEAVGSVFSVLDRQTRIDPDDADADPVETIRGDIEFRHVDFAYP
SRPDVMVFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPLAGKVMIDGKDIRRLN
LKSLRLKIGLVQQEPALFAATIFDNIAYGKDGATESEVIEAARAANAHGFISGLPEGYKT
PVGERGVQLSGGQKQRIAIARAVLKNPTVLLLDEATSALDAESECVLQEALERLMRGRTT
VVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVSRPDGAYSRLLQLQTHRI
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacctaacacaaccgatgccaagactgttccgacagaagcagagaagaagaaa
gaacagagtttaccattctttaaactcttctctttcgctgataaatttgattatctctta
atgttcgttggttctcttggtgccattgttcatggctcttccatgcctgtctttttttta
ctgtttggtcaaatggttaatggatttggtaaaaaccaaatggatttacatcaaatggtt
catgaagtctcaaaatattctctgtatttcgtctacttgggtttggtcgtttgcttctct
tcatacgcagagatagcatgttggatgtattctggagaaagacaagtagcagcattaagg
aagaaatatcttgaagcagtattaaaacaagacgttgggttctttgatactgatgcaaga
actggtgacattgtctttagtgtttctactgatactcttcttgttcaagatgccattagt
gaaaaggttggaaactttatacattacctctcaacatttttggcgggactagtcgttgga
tttgtatcagcatggaaattagctttgttaagtgttgcggtgattcccggaatcgctttc
gccggaggtttatacgcttatacactcaccggaattacttcaaagagccgtgaatcttat
gctaacgccggcgttatcgccgagcaggcaattgctcaagttcgaactgtttactcttat
gttggagagagtaaggcacttagttcgtattcggatgcgattcagtatacgcttaagctc
ggttataaagctgggatggctaaagggttgggtttaggatgtacttatggaatagcttgt
atgtcatgggctttggtgttttggtatgccggggttttcattcggaatgggcagaccgat
ggaggaaaagcgtttacggctatattttctgccattgttggtggaatgagtttggggcaa
tctttctcgaaccttggggcttttagtaaaggtaaagcggctggttacaagttgatggag
ataattaaccagaaaccaacgataattcaagacccgttagacggaaaatgcttggaccaa
gttcatgggaacattgagtttaaagatgtgacttttagctatccttcacggcctgatgtt
atgatcttcagaaactttaatattttctttccttccgggaaaactgtggcggttgttggt
gggagtggctctggaaagagtactgttgtttccctcattgagagattttacgatccaaac
agcgggcaaattctgttggatggtgttgaaataaagactcttcagttgaagtttttgcgt
gaacaaatcgggcttgtgaatcaagaaccagctctgtttgccaccaccatacttgagaac
atactctacggaaagcctgatgcaacaatggttgaagttgaagctgctgcttccgctgcg
aatgctcatagtttcattacattgcttcctaaaggttacgacacacaggttggagaacgt
ggagttcaactctcaggtggacagaaacagagaattgcaattgctagggcaatgttgaaa
gacccaaagattctgttactagatgaagctacaagtgctcttgatgctagctctgagagc
attgttcaggaagctttagacagagtcatggtagggaggaccaccgttgttgttgctcat
cgtctctgcaccatcagaaatgttgactccattgccgtgatacaacaaggccaagttgtt
gaaaccggaacacatgaagaactcattgccaaatccggtgcttacgcatccctcatcagg
tttcaagaaatggttggtactcgagatttctcaaatccgtcaactcgtcgcactcgttca
acccgtttgagccattctctgtcgacgaaatcactcagtttaagatcaggaagtttgagg
aatctgagctattcttacagcactggagctgatggtcggatagagatgatttcaaacgca
gagacagatcgaaagactcgtgcacctgaaaattacttttacaggcttctcaagcttaat
tcacctgaatggccttactcaatcatgggagccattggctcaattctttctggtttcatc
ggacctacatttgctattgtgatgagtaatatgatcgaagtcttctactacacagactac
aattcaatggagagaaaaacaaaggaatacgttttcatctacatcggtgctggtctctac
gcagtgggtgcttatttgatccaacattacttctttagcatcatgggagaaaacctcaca
acaagagtaagaagaatgatgctctcagctatcttgagaaacgaagttggttggttcgat
gaggatgaacacaactcaagcctgatcgctgcacggttagctactgatgcagccgatgtt
aaatccgctatagccgagagaatctcagtaattctacaaaacatgacttcacttctcaca
tccttcatagttgccttcatagtagaatggagagtctcacttctcatcttaggcacattc
ccacttctagtcctcgccaactttgctcagcaactatctttgaagggttttgctggagat
acagccaaggctcatgcaaagacctcaatgattgctggtgaaggagttagcaacattaga
actgtagcagcgttcaatgcacagagcaaaattctctctttgttctgtcacgagcttcgt
gttcctcagaaaagaagtttataccgaagtcaaacctcgggtttcctatttggcctctcg
cagcttgctctctatggttctgaggctttgattctctggtatggcgcccaccttgtgagc
aaaggcgtgtcaaccttttccaaagtgatcaaagtgtttgtggttttggtcattactgca
aactctgttgctgaaactgtcagtcttgctcctgaaattatccggggaggtgaagcggtt
ggttcggttttctcggtcttggataggcaaactcggattgacccggatgatgctgatgct
gatcccgttgagacaatccgtggagacatagagtttaggcatgtggatttcgcttaccct
tcaagaccagatgtcatggttttcagggactttaacctcagaatccgagctggacatagc
caagctctagtgggcgcaagtgggtcagggaagagttctgtgatcgcgatgattgagcgg
ttttatgatccacttgctggaaaagtcatgattgatggcaaagacatccgcaggctaaac
cttaaatctctaaggctcaaaatcggtcttgttcaacaagaaccagctcttttcgcagca
accatcttcgacaacatcgcatatgggaaagatggtgcaactgaatccgaggtaattgag
gcagcgcgggccgcaaatgctcatggtttcatcagtggtttgcctgaaggttacaaaact
ccagtgggcgaaagaggagtgcagttatcaggtgggcagaaacagaggatcgcgatagca
agagctgtgctcaagaaccctacagtgttgcttctagacgaagcaactagtgcactagat
gcagaatcagaatgtgtgctgcaagaggcgttagagaggctcatgagaggtcggaccacc
gtggtagttgctcaccgcttgtccaccatacgaggtgttgattgcataggtgtgattcaa
gacgggcggattgtggagcagggaagccattcagagctcgtaagccgaccagatggagct
tattcaaggctgttacagcttcaaacgcataggatttga
DBGET
integrated database retrieval system
