Arabidopsis lyrata (lyrate rockcress): 9313443
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Entry
9313443 CDS
T01578
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex isoform X1
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
9313443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aly04121
]
9313443
03036 Chromosome and associated proteins [BR:
aly03036
]
9313443
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
9313443
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
9313443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR35_TULP_N
CFAP43_N
YajC
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
9313443
NCBI-ProteinID:
XP_002875703
UniProt:
D7LNJ3
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MDSGINTSSRLNPQARCPLQRNFLPKNTSKENPERFIPNRSAMDFDYAHFQLTEGRNEKD
EATKVRSSPSREAYRKQLAETMNLNRTRILAFRNKPQAPVQLLPREHSVYSLYQQPKSVK
PRRYIPQNCERALDAPDIVDDFYLNLLDWGSANVLAIALGRTVYLWDASNGSVSELVTVD
EDMGPVTSINWAQDGLNLAVGLDNSEVQLWDSVASRKVRTLKGGHQSRVGSLAWNNHILT
TGGMDGKIINNDVRVRSHVVKTYRGHTLEVCGLKWSESGQHLASGGNDNLVNVWEHSTRR
SLHRFEEHTSAVKALAWCPFQSGLLATGGGGEDRTIKFWNTRTGACLNSVDTGSQVCSLI
WSKKERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLYMSQSPDGCTVASAAGDET
LRLWNVFGVPEDAKKAAPKAVPQPFSNVNRIR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggtatcaacacttcttctcgcttgaaccctcaagctcgatgcccacttcaa
cgaaacttcctccccaagaatacttccaaagaaaaccctgagagatttataccaaaccga
tcagccatggatttcgactatgcccacttccagcttacggaaggaagaaacgagaaagac
gaggcaacaaaggtaagatcatcaccatcaagagaagcttacaggaagcaattagctgag
acaatgaatctgaatcggacccggattctcgccttcaggaacaaacctcaagctccggtc
cagttacttcccagagagcactctgtttattctctttaccaacaacctaaatccgtaaag
ccgcgaagatacatccctcagaattgcgagagagcgttggatgcacctgatattgtggat
gacttttaccttaacttgcttgattggggcagtgctaatgttttagctatagctttgggt
cgtactgtgtatctatgggatgcttctaatggttctgtttctgagcttgtgactgttgat
gaagatatgggacctgttacaagtattaattgggcgcaagatggtcttaatctcgcggtt
gggcttgataactctgaagtccagctttgggattctgtagctagtcgtaaagtgagaacg
ttgaagggtggtcaccagtcaagagtaggatcattggcgtggaacaatcatatcttaaca
acgggaggtatggatgggaagattattaacaacgatgtacgggttagatctcacgttgtg
aaaacttacaggggtcacactcttgaggtttgtgggttgaagtggtcagagtctggacag
catttagcaagtggtggaaacgacaatttggttaacgtatgggaacattctaccaggcgg
tctttgcataggtttgaggaacacacatctgcggtaaaagctctggcttggtgccctttt
caatcaggtttacttgcaactggtggtggtggagaagataggacgataaagttctggaat
actcgaacaggagcttgcttgaattcggtagacactggctcacaagtttgttctttgata
tggagcaagaaggaaagagagttgcttagctcacatgggtttactcagaaccagcttaca
ctttggaagtacccatccatggtgaaaatggctgagctcaatggtcatacatcacgcgtt
ctatatatgtcacagagtccggatggttgtaccgtagcttcagcagcaggggacgagact
ctgaggctttggaatgtttttggagtaccagaggatgctaaaaaagctgctccaaaagca
gttccccaaccattttctaatgtaaatcgtattcgttga
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