KEGG   Arabidopsis lyrata (lyrate rockcress): 9313670
Entry
9313670           CDS       T01578                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    9313670
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:aly01001]
    9313670
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aly03032]
    9313670
   03036 Chromosome and associated proteins [BR:aly03036]
    9313670
   03400 DNA repair and recombination proteins [BR:aly03400]
    9313670
Enzymes [BR:aly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     9313670
Protein kinases [BR:aly01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   9313670
DNA replication proteins [BR:aly03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    9313670
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    9313670
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    9313670
SSDB
Motif
Pfam: TPR_ATM PI3_PI4_kinase FAT FATC TAN
Other DBs
NCBI-GeneID: 9313670
NCBI-ProteinID: XP_020880342
LinkDB
Position
Unknown
AA seq 3012 aa
MVASRDVHEIVSKLSSDKAKTREDGVKLLNTWLEGERSSTFCRFLSQNTAKLKLDEIPNA
ETWPFLVKLLLQCVSMEVSGSKRRMPKPTFAKTLRVVIQRTEETKFPGVQFPLLSMAKTL
FTHVHDILSNTPSFQSEYGTILRHLLEIREYRFQMRKRTYSSLVLLYMERAEAGFSEKKS
GQHSQKEEAFRYILTLQSLLENSPGDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECV
NTFLLKDGPNLGSLSFEIHNAVEQFVFRCWLTTHDKNLKEILVSYGRLQLNLTRGSSESS
SLVEQLLDVVTRELDLGSSSTSASWGDTTKDEKLGALNSYQNSLVELAAHVFYRACVNTS
RPSMSEKRARRQHIAMRMVDALTEGKWLWCAAFGCLVRNYCARINMDLLIYWFEAICTNF
QRLLEDASMRRSYDGLLWTLRSLQGLSSGLLLPDTTMDISKSPASSSELDRGWQSIWTSL
IRGLATFSSMSVIVDAVLVLLGSIISSNHINVGILPQEVWDHQLFRHIPSEPALYFIACY
FSRLGCQGNLQDDLHLRRNLLRAVCAPLSWKVRLTLNGRMVQLLPAAAFSLCAGFKTSLP
LPKEHLPTPSEWDVCEQIDDVDLERNFGLFECSVEALTRVCSNSRKISGCQVPDVVQLPL
VLRDPLLHDMDIYFLSITPEVKEKGPLSDIFMGCALLCHFMHGSYIARKGKGSSSFFLMA
CQYLLEGLDHAVEAVSKSLNDLQRLASLGFGSDFNEKGSIIVSLRSLTQSPVFSNGRDQN
LLGASYDAVIHSLENLLRSFAKVYGEYTEHAWNTHSDTVPSKSFALDSPEVGRIVDMDLD
LAEDTKERDIITAGGKAVPGLPVSTGNWKLGMVSLISCFSPVLQFPTWDVLYNLLEKESD
PKVLENILYHLCKLSCLTSMPKVDDLVIFLDGMLSTQVKMKRNCLNIVTALHVLLHTLSS
SRMDSSGVGKNCGLSLKGESFQVFVQLGAMVNKVSEFGLLGWFGRVKLINCICDLVLLNP
QTGQTMIERLLLMLNDSDYRVRFVLARQIGILFQTWDGHEALFQDICSSFGITLVTSSKE
KLVTAKDVLAAGPQPRQKMETVIITLMHLAYHSENIELQAVFMMCAVSAIDPCQRELIIA
ALDNLSAQLHYPSRFKYLEELLGPILFFWIACGVSLAGLIETSQLFIPNAEPKYFIHFCS
HWLLPALLLHEDHTNLDWVAKMAAQPVVVLVKENFVPIFSICMGLHCSKTSECDKGAMVL
QNSILYVGEISESERDKLIKQNMVSIVSFILSCASSSPEPPVPAFSRDTISLAVQTVVDG
FLETTDYPKNAAITDRINIFRPDRVFMFITEMHYRMSAACHHRHTRHHLAALEELTILLG
HRASVPSSLNYIFNLVGQFIGYPSLQDQCCSIASCLLDLFKSNPAKEIVSVLGDQLQFLV
SKLVTCCIDAEADTKISGSKSLQLVNLLHKLVVSSDSSLDEDIRDLEPLPDLKIFQVIRE
SHIRICEAYSPRNHLLKCARRSCYLPPRFLSRSLQALHNKLIASEVSQEDTNGETAETFW
QSDDEIVNAVWTLVRVSASDEADSMRLLASDFLSRVGIRDPHTVVFHLPGKLISMHDLQV
FGHNTGTKVRSLTENGISDDTLITLLNFLKKYLLDDSVKIIDVTSQTLRGILSTERGQQA
LSSFDSCERSSIEVHGRGVNLDIVEKILLDSQKQFKAENFSLETPEVWSTDNKTFDRWIC
QLVYCMIALCEDVPIRLCQNIALLKAEISELLFPSVIVSLAGRIGTDINLHDLITSQVKE
HIFIDSNKLTKSKQIMLNTLNELRMCYVLERSIFSGQTKREKNSRSCSTAAKIRDVETAP
NGMAASKTTNWEKVYWLSIDYLVVARSAVVCGAYLTASMYVEYWCEEKFGNLSLGDPDFS
YHDKLPDHVEILVSAITRINEPDSLYGVIHSNKLSAQIITFEHEGNWTRALEYYDLQARS
QKLVVPGSLSENLEVEQFQPKTSTWNSVFGEGEVQRQPFKGLIRSLQQTGCMHVLDLYCR
GLTSREGCFQYDPEFIELQYEAAWRAGKWDFSLLYPQTHCQPLQHAKNNNYHESLHCCLR
ALQEGDYDGFYGKLKDTKKELVLSISRASEESTEFIYSTVVKLQILHHLGLVWDLRWTTS
SHQSVHGYPVKQMACVDPMTPTMNQLSWLNKDWNSIITQTQLHMNLLEPFIAFRRVLLQI
LGCEECTMQHLLQSASLLRKGTRFSHAAASLHEFKFLCARSDGQQPVPDWLGKLEEAKLL
HAQGRHEVSISLANYILHNYQLKEEASDIYRVIGKWLAETRSSNSRTILEKYLRPAVSLA
EEQSSKICKRLVDRQSQAWFHLAHYADALFKSYEERLSSSEWQAAMRLRKHKTKELEVLI
KRFKSSKKAEQSDYSLKIQDLQKQLTMDKEEAEKLQVDRDNFLKLALEGYKRCLEIGDKY
DVRVVFRQVSMWFDLASQKNVIDNMLSTIKEVQSYKFVPLVYQIASRLGSSKDESGSNSF
QSALVSLIRKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDMDKKLAAEHLLQDIS
HYHGPMLRQMKQLVDIYIKLAELETRREDTNRRVALPREIRSVKQLELVPVVTATIPVDR
SCQYNEGSFPFFRGLSDSVTVMNGINAPKVVECFGSDGQTYKQLAKSGNDDLRQDAVMEQ
FFGLVNTFLHNNRDTWKRRLAVRTYKVIPFTPSAGVLEWVDGTIPLGDYLIGSSRSEGAH
GRYGIGNWKYPKCREHMSSAKDKRNAFVDVCTNFRPVMHYFFLEKFLQPADWFVKRLAYT
RSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRD
IIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKE
TEDYDGMNLEGLQEEFEGNKDATRALMRVKQKLDGYEGGEMRSIHGQAQQLIQDAIDTDR
LSHMFPGWGAWM
NT seq 9039 nt   +upstreamnt  +downstreamnt
atggttgcttcgagggatgttcatgagatcgtctccaagctctcgtcagataaagccaag
actcgcgaagatggtgtcaagttattgaatacatggctcgaaggggaaaggtcaagcacc
ttttgtagatttctttcgcaaaacactgctaagcttaagttggacgagattccaaatgct
gaaacgtggccctttttggttaaacttctccttcaatgtgtctcaatggaggtgtcaggt
agtaagcgacggatgcccaagccaacttttgcaaagacgcttcgtgttgttattcagaga
acagaagaaactaagtttcctggtgtacaatttcctttgctatctatggctaagaccctt
tttacacatgtacatgatatcttgagcaatacacctagctttcagtcagagtatggtacc
atactccgccatcttttggaaattagggagtaccgtttccaaatgaggaagcgcacatat
tccagtttggtgctgctatacatggaaagggctgaggcaggttttagcgagaaaaaaagt
ggtcaacatagccagaaggaggaggcatttcgttatattcttacgcttcagtcacttcta
gagaactcccctggtgattttcctgatgacctccgagaagaaattgtgaacggcctcatt
cacatcttctcttctgtaagagatgagggaaagctttcacgcaagcttattgaatgtgta
aatacgttcttgctgaaggatggtcctaatttaggctctttatcattcgaaattcataat
gccgttgaacaatttgtgttccgttgctggttaacaacccatgataaaaacctcaaggag
atacttgtttcttatggaaggctacagttaaatttgacaaggggttctagtgaatctagt
tctctggtggaacaacttttggacgtggttactcgtgaattggatcttggtagttcatca
acttctgcatcatggggtgatacaacaaaggatgaaaagttaggggcattgaacagctat
cagaatagcttggttgagctggctgcacatgtgttctaccgggcatgtgtcaatacatct
agaccatcaatgtcagagaaacgagctcgtaggcaacatattgccatgcgtatggtggat
gcactaactgaaggaaaatggctatggtgtgctgcttttggttgtctagttcggaattat
tgtgctcgcatcaatatggatctccttatttactggtttgaagccatctgcacaaacttt
cagagacttctggaggatgccagtatgagacgttcttatgatggtctactatggactttg
aggagtttgcaagggctctcctctggtttgttacttccagatactactatggacatatcg
aagtcacctgcttcctcaagtgagctagatcgtggttggcaatcgatctggacctcttta
atccgtgggctagcaacattcagcagcatgagtgtaattgttgatgctgtcttggtactc
cttggatcaattatttcaagtaaccacattaacgttggaattctgcctcaagaagtgtgg
gatcatcaattattcagacacataccctctgagccggccttgtacttcattgcatgttac
ttttcacgtctgggttgccagggaaacctgcaagatgatttacatcttcgacgaaatctt
cttagagcagtttgtgcccctctaagctggaaggttcgtttgactctaaatgggagaatg
gttcagcttctaccagcagctgctttttccctatgtgctgggttcaagacttcacttcca
ttacctaaggaacatcttccaacaccatctgaatgggatgtctgtgaacagatagatgat
gttgatctagaaagaaattttggactctttgaatgctctgtggaggctctaacaagagtt
tgctcaaattctagaaagatctctggttgccaagttcctgacgtagtacaactacctctg
gtattaagagatccattgcttcatgacatggatatctattttcttagcattactccggag
gtcaaggagaaaggaccattgtctgacatctttatgggatgtgctctgttgtgtcatttt
atgcatggttcttacatcgcaaggaagggtaaaggaagcagttcgttcttcttaatggca
tgccagtatttgttagaaggcctggatcatgctgttgaagcagtttcaaagagcctcaac
gatcttcaaaggcttgcttccctagggtttggctcagattttaatgagaaaggttctata
atagtttcgttgaggtcccttactcaatctcctgtcttcagcaacggaagagaccaaaat
cttcttggcgctagttatgatgctgtaattcattccttagagaaccttttgcggtctttt
gctaaagtctatggagaatatactgagcacgcatggaatacacattcagacactgtacct
tctaaatcgtttgcacttgattccccagaagttggcaggattgtggatatggatttagat
ttagctgaagacactaaggagagggatattataactgccggtggaaaagctgtacctggc
ctgcccgtttctacggggaactggaagttgggcatggtatcgctaatctcatgtttttct
ccagtacttcaatttcctacatgggatgttctatataacttattggagaaggaatctgat
cctaaggtgctggaaaatatactgtatcatctatgcaagctttcatgcttgacttctatg
ccgaaggttgatgatttggttattttcttggatggcatgcttagcacacaagtaaagatg
aagcgtaactgtctcaatatagtcactgctctgcatgttttacttcatactttatcatcc
tcgaggatggattcttctggagttggaaaaaattgtggtttgtctttgaaaggagaaagt
tttcaggtctttgtccaacttggcgcaatggtgaataaagtttctgaatttggtctcttg
ggatggtttgggcgtgtcaagctgatcaactgtatatgtgatcttgtcttacttaatcct
cagactggtcagacaatgattgagcgacttttgttgatgctaaatgactctgattatcga
gtgaggtttgtcctggcaagacaaattgggattttattccagacgtgggatggccatgag
gcattattccaagatatttgttccagctttggtattacattagtaacctcctcaaaggag
aaactagttaccgcaaaggatgttttggctgctggtcctcagcctcgccaaaaaatggag
actgtcatcattactcttatgcaccttgcttatcacagtgagaacatagagttgcaagct
gtttttatgatgtgcgctgtttcagctatagatccctgtcagagggaattaatcattgcc
gcacttgacaatctatcagcacaactccattacccatctaggttcaagtatctggaagaa
ctcttgggcccgattctttttttctggattgcatgtggtgtcagtttagctggtcttatt
gagacaagtcagctgttcattccaaacgctgaaccgaaatatttcatccacttttgttcc
cactggctgcttccagctcttctattgcatgaagatcatactaaccttgactgggtagct
aagatggctgcccaacctgtggttgttttggtcaaagaaaattttgtgccaatattttcg
atatgtatgggattgcactgtagtaaaacgtcagaatgcgataaaggtgcaatggtgctt
cagaattcaatattgtatgtaggtgagatcagcgagagtgagagggacaagctgattaaa
cagaatatggtttctattgttagttttattttatcatgcgcttcgtcttcaccagaacct
ccagttcctgctttttctcgtgacactatttcacttgcagttcaaacagttgtggatggt
tttctggaaaccactgattatcctaagaatgcggccatcactgacaggataaacattttt
cgcccggatagagtgttcatgttcattacagaaatgcactatagaatgtcagctgcatgc
catcatcggcatacgcgtcatcatttggccgctcttgaagagcttacaattcttcttggt
catagagcgtcagttccaagttccttaaattacatattcaatcttgttggacaatttatc
ggctatccctcactacaagaccagtgttgtagtatagcgtcctgtttactggatttgttc
aaaagcaatccggccaaagaaattgttagtgtactaggtgaccaactccagtttttggtc
tcaaagctggttacatgctgcattgatgctgaagcagataccaaaatttctggttctaag
tcattgcaactcgttaatttgctacacaagctagttgttagttcagattcttctcttgat
gaagatatcagagatttggaacccctcccggatttaaaaattttccaagtcattcgtgaa
tcacacatcaggatatgcgaagcatattctccgaggaatcatctgttgaagtgtgctcga
agatcttgttatcttccaccaagattcctttccaggagtctccaagcactgcataacaag
ctcatagcttctgaagtttctcaagaagacacaaatggagaaactgcagaaacattttgg
cagtctgatgatgaaattgtaaatgctgtttggactcttgtccgagtgtctgcctctgat
gaagcagatagtatgagacttttggcgtctgattttctttccagggttggtattagggac
ccccacactgttgttttccatcttcctgggaagttaatctccatgcatgatcttcaagtt
tttggccataatactggaacaaaagtcagatctttgactgagaacggcatatccgatgac
acccttatcacactgctaaattttttgaagaagtatcttttggatgactctgtaaagatt
attgatgtaacatcacaaacccttcggggaattctttcaaccgaaaggggccagcaagca
ttatcatcttttgattcatgtgagagatcttcaattgaggtgcatggtaggggcgtgaac
cttgacattgtggaaaagatcttattggatagccaaaagcagttcaaagctgagaacttt
tcactggagacgcctgaagtgtggtccacagataataaaacctttgatagatggatttgt
cagctagtgtactgtatgatcgctttatgtgaggatgtcccaataaggttatgccagaac
atagcattgctgaaagctgaaatatctgaacttctattccctagtgttattgttagtctt
gcgggacgaatagggacggatataaatttacatgacttgattacgtcacaggtgaaagag
catatcttcattgattcaaacaagctaacaaaatcgaagcaaattatgttaaataccctg
aatgagctgcggatgtgttatgtcctcgaaagatcgattttttctgggcaaactaagaga
gaaaagaattcaagatcttgttccacagctgctaagattagagatgtggaaactgcacca
aatggaatggcagcatccaaaactactaattgggagaaggtttattggctttccattgat
tatcttgttgttgccagatcagcagtagtttgtggtgcatatttgaccgcctccatgtat
gtggagtattggtgtgaggagaaatttggcaatctaagccttggagatcctgatttttct
tatcatgataagttaccggatcatgttgagatacttgtgtctgcaataacaagaataaac
gagcctgacagcttatatggggttatacattcaaataagttgtctgctcaaataatcaca
ttcgagcatgagggaaactggactagggcacttgagtattatgacttgcaagcacgttca
cagaaactggtggtgccgggtagcctttctgaaaatctagaggtggaacaatttcagcca
aaaactagtacatggaattctgtttttggtgaaggggaggtccagagacaaccgttcaaa
ggactcattaggtcgttgcagcagacaggctgtatgcatgtcctggatttgtattgccga
ggcttaacttcccgagaaggatgctttcagtatgatccagagttcatcgaattgcagtat
gaggctgcatggcgtgcaggaaaatgggatttttctttactttatccgcaaactcactgc
caacctctgcaacatgcaaagaacaataattatcatgaaagtttgcactgttgtttgaga
gcattgcaagaaggggattacgatgggttttatggaaaactgaaggatactaagaaggag
cttgtgttgtccatttcccgtgcaagtgaagaaagcactgaatttatatactcaacagta
gtgaaacttcagattcttcatcatcttggactagtttgggatcttcgctggacgacatct
tcacatcaaagtgtgcatggctatccagtcaaacaaatggcatgcgtagaccccatgact
ccaacaatgaatcagttgtcttggctgaataaggattggaactctattattacgcaaact
cagttgcacatgaatttgttggagccatttatcgcatttaggcgagttcttctccaaatc
ttgggatgtgaggaatgtaccatgcaacatcttttgcagtctgcttcattacttcgcaag
ggaacaaggttttctcatgcagctgcgtctctgcatgagttcaagtttctttgtgcaaga
agtgatggacaacaacccgttccagactggcttggaaagcttgaagaggcgaagctatta
catgcccaagggcggcatgaagtttccattagtcttgcaaactatattttacataattat
caattaaaagaagaggcttcagatatatatcgtgtgattggaaagtggctagcagaaacc
agatctagcaactctagaacaattttagagaagtatctcaggcctgcagtttcgcttgct
gaagaacagagttccaagatctgcaaaagattggtagatagacagagccaagcttggttt
catctggctcattatgcagatgctctatttaagagttatgaggaaagactctcctccagt
gaatggcaagctgcaatgcggctacgaaaacacaagacgaaagagttggaggtgcttatt
aaacggtttaagagttcaaagaaggcggagcaatctgactattcactgaagatccaagat
ctgcagaagcaactaacaatggataaagaagaagcagaaaaactgcaggttgacagggat
aactttctgaaacttgcattggaggggtataaacgttgtctggaaattggtgacaagtat
gatgttcgagtggtatttcggcaagtatccatgtggttcgatcttgcctcccagaaaaat
gttattgataacatgttgagcaccattaaagaggttcagtcttacaaatttgtacccctt
gtttatcaaattgcttcaaggttgggcagttccaaagatgaatcaggatctaacagcttt
cagtctgcactggtttcgcttatcagaaaaatggccattgatcatccataccatacaatc
ttgcagcttctggctttggcaaacggtgaccgtatcaaggataaccaacgcagtagaaat
tctttcgtggttgatatggataaaaagcttgcagcagagcatctcctgcaggatatatca
cattatcatgggcctatgcttagacaaatgaaacaactggtagatatctacatcaagctt
gcagagcttgaaacaaggagagaggataccaatagaagggttgcactaccaagagaaatt
cgtagtgtgaaacaattagaacttgtacctgtagtgactgctacaattcctgttgatcgt
agctgccaatacaatgaagggtcattcccgtttttcagaggtttatcagattctgttaca
gtgatgaacggtataaatgctccaaaagtagttgaatgctttggttctgatggccaaaca
tataagcaacttgcaaaatctggcaatgatgacctcagacaagatgctgttatggaacaa
ttttttggactcgtcaatacctttctacacaataaccgggacacttggaagagaagattg
gctgtgcgcacatacaaggttattccttttactccaagcgctggtgttcttgagtgggtc
gatggcacaattccacttggagattatcttataggaagctcaaggagtgagggcgctcat
ggtcgttatggcattggaaactggaaatatcccaaatgccgagaacatatgtcgagtgca
aaggacaaacgcaatgccttcgtggatgtctgtacaaacttcaggcctgtcatgcattac
ttcttccttgaaaagttcctgcagcccgctgactggtttgtgaagaggcttgcttataca
cgtagtgttgcagctagttccatggttgggtacatcgttggtcttggtgatcgtcatgcc
atgaatattttaatcgatcaagctacagcagaagttgtccacatagatcttggagttgct
tttgaacaaggattaatgctcaagactcctgaaagggttccgttcagactgacaagagac
ataattgatggaatgggtatcacaggagtggaaggcgttttcaggagatgttgcgaagaa
accctgtctgtaatgcgaacaaataaagaggcgctgcttactattgtcgaagtttttata
catgatcctctttacaaatgggccttgtcccccttaaaggctttgcaaagacagaaggaa
actgaagattatgatggcatgaacttggaagggttacaagaggaattcgagggaaacaag
gatgctacacgtgccttgatgcgtgtcaagcaaaaacttgatggatacgagggtggtgag
atgagaagcattcatggccaggcgcagcaactaatacaagatgcaattgacacagatcgt
ttgtcccatatgttccctggctggggagcttggatgtaa

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