Arabidopsis lyrata (lyrate rockcress): 9313700
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Entry
9313700 CDS
T01578
Name
(RefSeq) long chain base biosynthesis protein 2b
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00600
Sphingolipid metabolism
aly01100
Metabolic pathways
aly04382
Cornified envelope formation
Module
aly_M00094
Ceramide biosynthesis
aly_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
9313700
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
9313700
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
9313700
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
9313700
Amino acid related enzymes [BR:
aly01007
]
Aminotransferase (transaminase)
Class II
9313700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
9313700
NCBI-ProteinID:
XP_020879951
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFGWWRTNNLQGYAPICLAHEDFYIRRLY
HRIQDCFGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC
TPRVIESLKKFSATTCSSRVDAGTTSVHAELEECVAKYVGQPAAVVFGMGYATNSAIIPV
LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPAHLEKVLKEQIAEGQPRTHRPWK
KIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKHQCPAHLYATSISTPSATQIISAIKVILG
EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
EKLAVVVVGFPATPLLLARARICISASHSREDLIKALQVISKAGDLTGIKYFPAAPKKQE
VEKNGIKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgattacgatcccataccttaccgctgtatcaacgtatttcagctacggtttgctcttc
gcctttggtcagcttcgcgattactcccgcctaatcttcggttggtggcgcaccaacaat
ctccagggatacgcgccgatctgcttggcgcatgaggatttctacatcagacgattgtat
catcggattcaggactgttttggacgtcccatatcaagtgcacctgatgcctggattgat
gtggttgagagagtttctgacgataacaacaagacgctaaagcgaactacaaagactagt
aggtgccttaatctggggtcctacaattatcttggatttggttcttttgatgaatattgt
acgcctcgtgttattgagtctttgaagaaattttcagctactacatgtagctctcgcgtt
gatgcaggaactacatctgtgcatgcagaacttgaggaatgtgttgctaaatatgtcgga
caacctgctgctgttgtctttggcatgggctacgcaacaaactcggctattattcctgtc
ttgattggaaagggagggttgataataagcgattctttgaaccatacttcaattgtcaac
ggcgctcgaggttcaggagctactatccgtgttttccaacacaacacacctgctcatttg
gaaaaagtattgaaagaacaaatcgctgagggacaacccaggacgcatagaccgtggaag
aaaattattgttgttgttgagggtatttacagcatggaaggggaaatttgtcatctgccc
gagattgtctcaatatgcaagaagtataaggcatatgtttacttggacgaagctcacagc
attggagcaattggcaagacaggaaggggtgtttgtgaacttctgggggttgacactgct
gatgtggacataatgatgggaactttcacgaaatcttttgggtcttgtggtggctatatt
gccggatcaaaggacctcatccaatatttgaagcaccaatgcccggctcacctttacgca
acgtcaatttcaactccttccgcgacacaaatcatatcggcgataaaggttatccttgga
gaggacggttcaaacagaggggcacaaaagttagcaagaataagggagaacagcaacttt
ttcagggctgagttgcagaagatggggtttgaggttcttggagacaatgattccccagtc
atgccaataatgctttacaatccagcaaaaattccagccttctcaagggaatgtttgcga
gaaaaattggcagttgtggtcgtcggtttcccagctacaccactattgctagccagggct
cgtatttgcatatccgcatctcactcaagagaagatcttattaaagccctacaggttata
agcaaagcaggtgaccttaccgggatcaaatattttccggctgctccaaagaagcaagaa
gtagagaaaaatggcatcaaattggattaa
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