Arabidopsis lyrata (lyrate rockcress): 9313742
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Entry
9313742 CDS
T01578
Name
(RefSeq) general transcription factor 3C polypeptide 5 isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9313742
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
9313742
TFIIIC, fungi type
9313742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
9313742
NCBI-ProteinID:
XP_020880732
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MGIIEEGIISGTLPSKEAFVVHFPGYPSSISRAIETLGGIQGISQARESISNKLELRFRP
EDPYAHPALGEQRPCCGFLLRISKQDIKKPESQPVLATSSDVCLEEASTVLCADIIARVS
ESFHFDGMADYQHVIPIHADIAQQKKRKWMDVDSLTGNSDLMGLADEDVMMLLPQFFAPK
DIPDNVALKPPATSGPKKKDDAATQNFYEIDVGPVFAIDFSVKEIPKKLKWEDFVSRSSN
HWQWQVSVSALFEERPIWTRDSVVQRLLDKGLKCTHHMLNRFLLRAAYYFSSGPFLRFWI
KRGYDPRNDPESRVYQRMEFRVPPELRSYCDANATNSAKPSWNDICAFKLFPFKCQTFLQ
LFELDDEYIQREIRKPPKQTTCSHKSGWFSEALLDTLRLRVAVRFVSVFPEPGFEDVFKS
IQEEFERSEKVQSQKETLKPSLVKHREATKSSEDMEKCKSVNEDVDANVNEDGDDENLDD
EDEEEEEEEEEEVDMAAGDNEISLGSHGYLDTENSSRTYLQGLFDSFPTSEPGLYGDFAV
DDGSDGEFQIYEEESEGLYSIDDDHNDDDDDDDD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcatagaagaaggaataatctcaggtaccttgccaagcaaggaggcgtttgta
gtacacttccctggttacccatcttctatttcccgagccattgaaacacttggaggtatc
caaggaatttcacaagcaagggaatcaatttcaaataagcttgagctgcgtttccggcct
gaagatccttatgcacatcctgcattgggtgaacaacgtccttgctgtggttttttgtta
agaatttctaagcaggatatcaagaaacctgaaagtcagcctgttcttgccactagtagt
gatgtatgtttagaggaagctagtacagttctatgtgcagatatcatagctcgtgtgtct
gaatcgtttcactttgatggcatggctgattatcagcatgttattccaattcacgcggac
attgcgcagcagaaaaagagaaagtggatggatgttgattcccttacaggaaacagtgat
ttgatgggcctggctgatgaagatgtgatgatgttattgccacagttctttgcacccaaa
gatataccagacaatgtggcgttgaaacctccggcaacatctggtcctaaaaagaaagat
gatgcggcaactcagaacttttatgagattgatgttggcccagtatttgcaattgatttc
agtgtcaaagagatcccaaagaaactgaagtgggaagactttgtttctcgcagctccaac
cactggcaatggcaggtatcagtgtctgcattgtttgaggagcggcctatatggacaagg
gattctgtagttcaacgactacttgataaaggtcttaaatgtacacatcatatgttaaac
aggtttctgctcagggctgcgtattatttctccagtggtccatttcttaggttctggatt
aaaagaggctatgatccacggaatgatcctgagtctcgtgtatatcagagaatggaattc
agggttcctcctgaattacggagttattgtgatgccaatgcaactaacagcgcaaagcca
agctggaacgacatttgtgcttttaagttatttcctttcaaatgccaaacgtttctgcag
ttgtttgaacttgacgacgagtacatccagcgagagataagaaagcctcccaagcaaact
acttgtagccataaatcaggatggttttctgaagctctgcttgatactttgagactccgt
gtagctgtgaggtttgtgtctgtcttccctgagccaggtttcgaagatgtatttaaatcc
attcaagaagaatttgagaggtcagaaaaagtacaaagtcagaaagagacacttaaacca
tctttagtgaagcaccgtgaggcaactaaaagctctgaagacatggaaaagtgtaaaagt
gtaaacgaagatgttgatgctaatgttaacgaggatggagatgatgaaaatctggatgac
gaagatgaagaagaagaagaagaagaagaagaagaagtcgatatggctgcaggagacaat
gagatatctctcggttcccatggatatcttgatactgagaacagctccaggacgtatctg
caaggcttgttcgatagttttccaaccagtgaacctggtttatatggagactttgctgtt
gatgatgggagtgatggagagtttcagatatacgaggaagaatctgagggattgtattcc
attgatgatgatcataatgatgacgacgacgatgatgatgactga
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