Arabidopsis lyrata (lyrate rockcress): 9313754
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Entry
9313754 CDS
T01578
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
9313754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9313754
03029 Mitochondrial biogenesis [BR:
aly03029
]
9313754
Membrane trafficking [BR:
aly04131
]
Autophagy
Autophagosome formation proteins
ULK complex
9313754
Atg1 complex
9313754
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
9313754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
9313754
NCBI-ProteinID:
XP_020882142
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MDFPENLPSDIGRLEQIVSHFFPKALHIVLNSRIPSLQSRGRSRERSSSGLNVRKSDKWF
NLVMGDRPPALEKLHSWHRNILDSMIIDIILVHPISTDNLDVDDDHHGDSTGRSAETVIE
RWVVQYENPLIMSPLSSESATRYQKVYKKSIILLRSLYAQTRLLPAYRVSRQLSSSLASS
GYDLIYKVSSFSDIFSGPVTETMKEFRFAPVEVPPGRLCASVTYRSDLSDFNLGAHITLP
PRIITDYVGSPATDPMRFFPSPGKSVEGNSFIGRAGRPPLTGSSAERPHSWTSGFHRPPA
QYPTPNQSFSPAHSHQFSPGLHDFHWSRTDAFGDNHQLSPPFSPSGSPSTPRYISGGNSP
RINVRPGTAPVTIPSSATFNRYVSSNFSEPGRNPLPPFSPKSTRRSPSSQDSLPGIALYR
SSRSGESPGLMNQYPAQKLSKDSKYDSGRFSGVLSSSDSPRFGFSRSPSRLSSQDDLDDP
DCSCPFDFDDVDESGLQYSQSLDRRKTSGSISQSLPLGRRSSQDAAVGVLVHMLKTAPPL
RQDSSTYMASMSGVQREGSVSGTESEFSMARSTSDALEELRNYKQLKDLLLSKSKSGSGA
TRVH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattttccagagaatttgccatcagatataggaagattagagcagattgtttctcat
ttcttcccaaaagcattacacatagttcttaattccagaatcccttcgttgcaatctcgt
ggtcgtagtcgtgagcgttcatcatcaggtcttaatgttagaaaaagcgataaatggttt
aatcttgtgatgggagatcgtcctcctgcgttggagaaattgcattcttggcataggaat
attttggattctatgattattgatatcattcttgttcatccgatttcaaccgataatttg
gatgttgatgatgatcatcatggtgattctactggtagatcagctgagactgtgattgag
cgttgggttgttcagtatgagaatcctttgattatgtctcctctgagttctgagtctgct
acccgttatcagaaggtttacaagaaatctatcattctgttgcggtctctttatgcgcag
actcggcttcttcctgcttatcgtgtttctaggcagctgagttcgtctcttgcttcttct
ggttatgatctgatttacaaggtttcatctttcagtgatatattctctggtcctgtgacg
gaaacaatgaaagagtttcgttttgctccagttgaagtacctcctggtcgtctttgtgca
tcggttacttaccgttctgacttatctgatttcaatctcggtgctcatatcacattgcct
ccgagaatcataactgattatgtaggaagtcctgcaactgatcctatgaggtttttccct
tctccagggaaaagtgttgaaggaaattcctttattggtagagctggtcggcctccattg
actggttcatctgctgaacgtccacatagctggactagcggctttcacagacctccagct
caatacccaacacctaaccaatctttttctcctgctcattcacatcaattttcacccggg
ttacatgatttccactggtcacgtacagatgcatttggtgacaatcaccagctttcacct
cctttttcgccatcgggttctccgtctactccaagatacatatctgggggtaacagtccg
cgcattaatgtgagaccagggactgctccagtgaccattccttcttcagccacattcaat
agatacgtttcatctaacttctctgagccaggtaggaatccacttcctcctttttccccc
aaaagcacaagacgttccccttcatcgcaggactctttgcctgggattgcattgtacagg
agttctagaagcggagagtctcctggattaatgaaccagtaccctgcccagaagttgtca
aaggacagcaaatacgattcaggccgcttctcaggagttctgtcttcgagtgactcacca
agatttgggttttctaggagccccagtagattatcttcccaagacgacttggatgaccct
gattgttcatgcccttttgatttcgatgatgttgacgagtcaggacttcagtacagccaa
agtcttgaccggaggaaaacttcaggctctatatcacagtcgctacctctagggagaagg
tcatcacaggatgcagctgttggtgttctggttcacatgctgaagacagcaccgccatta
cgacaagactcgagcacttacatggcgtcaatgtctggggttcagagagaaggttcagtg
tcaggtacagaatctgaattttcgatggctcgtagcacatcagatgcactagaggagctg
agaaactacaaacagctcaaagacttgcttctctccaaatccaaaagtgggtctggagca
actcgtgtccactga
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integrated database retrieval system