KEGG   Arabidopsis lyrata (lyrate rockcress): 9313754
Entry
9313754           CDS       T01578                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:aly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    9313754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9313754
   03029 Mitochondrial biogenesis [BR:aly03029]
    9313754
Membrane trafficking [BR:aly04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    9313754
   Atg1 complex
    9313754
Mitochondrial biogenesis [BR:aly03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    9313754
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 9313754
NCBI-ProteinID: XP_020882142
LinkDB
Position
Unknown
AA seq 604 aa
MDFPENLPSDIGRLEQIVSHFFPKALHIVLNSRIPSLQSRGRSRERSSSGLNVRKSDKWF
NLVMGDRPPALEKLHSWHRNILDSMIIDIILVHPISTDNLDVDDDHHGDSTGRSAETVIE
RWVVQYENPLIMSPLSSESATRYQKVYKKSIILLRSLYAQTRLLPAYRVSRQLSSSLASS
GYDLIYKVSSFSDIFSGPVTETMKEFRFAPVEVPPGRLCASVTYRSDLSDFNLGAHITLP
PRIITDYVGSPATDPMRFFPSPGKSVEGNSFIGRAGRPPLTGSSAERPHSWTSGFHRPPA
QYPTPNQSFSPAHSHQFSPGLHDFHWSRTDAFGDNHQLSPPFSPSGSPSTPRYISGGNSP
RINVRPGTAPVTIPSSATFNRYVSSNFSEPGRNPLPPFSPKSTRRSPSSQDSLPGIALYR
SSRSGESPGLMNQYPAQKLSKDSKYDSGRFSGVLSSSDSPRFGFSRSPSRLSSQDDLDDP
DCSCPFDFDDVDESGLQYSQSLDRRKTSGSISQSLPLGRRSSQDAAVGVLVHMLKTAPPL
RQDSSTYMASMSGVQREGSVSGTESEFSMARSTSDALEELRNYKQLKDLLLSKSKSGSGA
TRVH
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggattttccagagaatttgccatcagatataggaagattagagcagattgtttctcat
ttcttcccaaaagcattacacatagttcttaattccagaatcccttcgttgcaatctcgt
ggtcgtagtcgtgagcgttcatcatcaggtcttaatgttagaaaaagcgataaatggttt
aatcttgtgatgggagatcgtcctcctgcgttggagaaattgcattcttggcataggaat
attttggattctatgattattgatatcattcttgttcatccgatttcaaccgataatttg
gatgttgatgatgatcatcatggtgattctactggtagatcagctgagactgtgattgag
cgttgggttgttcagtatgagaatcctttgattatgtctcctctgagttctgagtctgct
acccgttatcagaaggtttacaagaaatctatcattctgttgcggtctctttatgcgcag
actcggcttcttcctgcttatcgtgtttctaggcagctgagttcgtctcttgcttcttct
ggttatgatctgatttacaaggtttcatctttcagtgatatattctctggtcctgtgacg
gaaacaatgaaagagtttcgttttgctccagttgaagtacctcctggtcgtctttgtgca
tcggttacttaccgttctgacttatctgatttcaatctcggtgctcatatcacattgcct
ccgagaatcataactgattatgtaggaagtcctgcaactgatcctatgaggtttttccct
tctccagggaaaagtgttgaaggaaattcctttattggtagagctggtcggcctccattg
actggttcatctgctgaacgtccacatagctggactagcggctttcacagacctccagct
caatacccaacacctaaccaatctttttctcctgctcattcacatcaattttcacccggg
ttacatgatttccactggtcacgtacagatgcatttggtgacaatcaccagctttcacct
cctttttcgccatcgggttctccgtctactccaagatacatatctgggggtaacagtccg
cgcattaatgtgagaccagggactgctccagtgaccattccttcttcagccacattcaat
agatacgtttcatctaacttctctgagccaggtaggaatccacttcctcctttttccccc
aaaagcacaagacgttccccttcatcgcaggactctttgcctgggattgcattgtacagg
agttctagaagcggagagtctcctggattaatgaaccagtaccctgcccagaagttgtca
aaggacagcaaatacgattcaggccgcttctcaggagttctgtcttcgagtgactcacca
agatttgggttttctaggagccccagtagattatcttcccaagacgacttggatgaccct
gattgttcatgcccttttgatttcgatgatgttgacgagtcaggacttcagtacagccaa
agtcttgaccggaggaaaacttcaggctctatatcacagtcgctacctctagggagaagg
tcatcacaggatgcagctgttggtgttctggttcacatgctgaagacagcaccgccatta
cgacaagactcgagcacttacatggcgtcaatgtctggggttcagagagaaggttcagtg
tcaggtacagaatctgaattttcgatggctcgtagcacatcagatgcactagaggagctg
agaaactacaaacagctcaaagacttgcttctctccaaatccaaaagtgggtctggagca
actcgtgtccactga

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