Arabidopsis lyrata (lyrate rockcress): 9313858
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Entry
9313858 CDS
T01578
Name
(RefSeq) UPF0183 protein At3g51130
KO
K27411
phagosome assembly factor 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9313858
Membrane trafficking [BR:
aly04131
]
Autophagy
Other autophagy associated proteins
Others
9313858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
9313858
NCBI-ProteinID:
XP_020881059
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MKDYSKIGDKLVMQRPRRRLEGTAMGATVFDLRPGVGIGPFSIGMPICEAFAQIEQQPNI
YDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYATSMIGG
PSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPNQYTDSCHDGEAALPLE
FPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYMEEVHIKLGKELYFTVG
GQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTTICGDYFYNYFTRGLDI
LFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISGGEDGAEANRGGNKITPSTNWDQVK
EILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVMKNGHIATITLFQS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattattcgaagatcggcgacaaactggtgatgcagagacctagacgacgattg
gaaggcaccgccatgggcgccaccgtgttcgatctccgtcccggcgtcggcatcggacct
ttctctatcggaatgccgatttgtgaagcatttgctcaaatagagcagcagcctaacata
tatgacgttgttcatgttaaatactacgacgaggatcctttgaaactggatgttgtcatt
agctttccggatcatgggtttcatcttcgatttgatccctggtctcagaggttacggctt
gttgagatatttgatgtcaagcggcttcagatgcgctacgccacttctatgattgggggt
ccatcaactctggccacgtttgtcgctgtttatgcactttttggaccaacctttcctggg
atttatgataaagaaagagggatttattctctgttttacccggggctatccttcgagttt
ccaattccaaaccagtacacggactcctgccatgatggagaagcggcactaccattagag
tttcctgatggcaccacaccagtaacatgccgagtctctatatatgacaactcaagtgac
aaaaaagttggtgtcggaaaattgatggatagagcttctgttcctcctttacctcctggc
agtctgtatatggaagaggtccatatcaagcttggcaaggaactatactttactgttgga
ggccagcatatgccttttggtgcatcaccacaggatgtatggactgaattaggtcgacca
tgtgggattcacccaaagcaggtagatcaaatggttattcattccgcgtcagatccacga
ccaaaaacaactatctgtggtgattacttttacaactattttactcgtggtttggacatc
ctgtttgacggcgagactcacaaagttaaaaagtttgttcttcacaccaactatcccggt
catgctgatttcaactcatacattaagtgcaactttgtgatttctggtggagaggatggg
gcagaagcaaacagaggtggaaacaagatcactccaagcactaattgggatcaggtcaag
gaaatactgggggaatgtggcccagcagctattcagacgcaaggctcaacgagcaaccct
tttggatccacatatgtgtatggctatcagaatgttgcttttgaggtgatgaagaacggt
catatagccactataaccttgtttcagtcatga
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